RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HPGDP15428 266 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 HIST1H1CP16403 213 aaKnown RBP19.73■□□□□ 0.75
CLN6-224ENST00000638076 GPR50Q13585 617 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 CD226Q15762 336 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 BAK1Q16611 211 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 CCBE1Q6UXH8 406 aaPredicted RBP19.73■□□□□ 0.75
CLN6-224ENST00000638076 Q8N9G6 341 aaPredicted RBP19.73■□□□□ 0.75
CLN6-224ENST00000638076 SDR9C7Q8NEX9 313 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 OR4K13Q8NH42 304 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 OR1L3Q8NH93 324 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 SMPDL3BQ92485 455 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 OR1F2PQ96R84 312 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 NXF5Q9H1B4 397 aaKnown RBP19.73■□□□□ 0.75
CLN6-224ENST00000638076 TRIM36Q9NQ86 728 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 UBQLN4Q9NRR5 601 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 TBC1D24Q9ULP9 559 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 POLHQ9Y253 713 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 IER3IP1Q9Y5U9 82 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 SPEGQ15772 3267 aa19.72■□□□□ 0.75
CLN6-224ENST00000638076 GTPBP1O00178 669 aaKnown RBP19.72■□□□□ 0.75
CLN6-224ENST00000638076 BCAT2O15382 392 aaPredicted RBP19.72■□□□□ 0.75
CLN6-224ENST00000638076 MYF5P13349 255 aa19.72■□□□□ 0.75
CLN6-224ENST00000638076 GLYR1Q49A26 553 aaPredicted RBP19.72■□□□□ 0.75
CLN6-224ENST00000638076 PLXDC1Q8IUK5 500 aa19.72■□□□□ 0.75
CLN6-224ENST00000638076 FAM98AQ8NCA5 519 aaKnown RBP19.72■□□□□ 0.75
CLN6-224ENST00000638076 SLC46A1Q96NT5 459 aa19.72■□□□□ 0.75
CLN6-224ENST00000638076 TIGARQ9NQ88 270 aa19.72■□□□□ 0.75
CLN6-224ENST00000638076 HAO2Q9NYQ3 351 aa19.72■□□□□ 0.75
CLN6-224ENST00000638076 CLCA3PQ9Y6N3 262 aa19.72■□□□□ 0.75
CLN6-224ENST00000638076 A8MU76 341 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 DVL2O14641 736 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 DUX1O43812 170 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 NCR1O76036 304 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 IL33O95760 270 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 APOA1P02647 267 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 GAAP10253 952 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 PPICP45877 212 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 SLC35F3Q8IY50 421 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 ZNF440Q8IYI8 595 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 SLC25A45Q8N413 288 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 ZNF527Q8NB42 609 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 FAM71CQ8NEG0 241 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 OR5W2Q8NH69 310 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 PHOSPHO1Q8TCT1 267 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 MVB12AQ96EY5 273 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 NDC1Q9BTX1 674 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 HOXD1Q9GZZ0 328 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 HEATR5AQ86XA9 2040 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 FABP12A6NFH5 140 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 DYRK3O43781 588 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 SSX4O60224 188 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 PPM1BO75688 479 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 RGS9O75916 674 aaPredicted RBP19.71■□□□□ 0.75
CLN6-224ENST00000638076 MT-ND5P03915 603 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 RORAP35398 523 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 CCR4P51679 360 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 AFF3P51826 1226 aaKnown RBP19.71■□□□□ 0.75
CLN6-224ENST00000638076 FNDC7Q5VTL7 733 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 FAM181AQ8N9Y4 354 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 NLGN4YQ8NFZ3 816 aaPredicted RBP19.71■□□□□ 0.75
CLN6-224ENST00000638076 DNASE2BQ8WZ79 361 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 HPS1Q92902 700 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 COMMD3Q9UBI1 195 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 ADAM18Q9Y3Q7 739 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 CEP192Q8TEP8 1941 aa19.71■□□□□ 0.75
CLN6-224ENST00000638076 VCANP13611 3396 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 IGKV3D-11A0A0A0MRZ8 115 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 OIP5O43482 229 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 FOLR1P15328 257 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 GALP22466 123 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 CSF2RBP32927 897 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 RPL4P36578 427 aaKnown RBP19.7■□□□□ 0.74
CLN6-224ENST00000638076 ZNF85Q03923 595 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 GXYLT1Q4G148 440 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 SLC2A12Q8TD20 617 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 TMCO6Q96DC7 493 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 C4orf36Q96KX1 117 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 E9PI62 339 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 SCDO00767 359 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 UBL4AP11441 157 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 GLB1P16278 677 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 ADH7P40394 386 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 FAAH2Q6GMR7 532 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 CBLN3Q6UW01 205 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 APOOLQ6UXV4 268 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 GPR135Q8IZ08 494 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 D2HGDHQ8N465 521 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 MARCH7Q9H992 704 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 ZMIZ1Q9ULJ6 1067 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 ZNF337Q9Y3M9 751 aa19.7■□□□□ 0.74
CLN6-224ENST00000638076 A0A1B0GVT2 93 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 J3QLW9 94 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 UTS2O95399 124 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 IGKV3-11P04433 115 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 IL7P13232 177 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 ZNF19P17023 458 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 EFNA3P52797 238 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 POU4F2Q12837 409 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 SKP2Q13309 424 aa19.69■□□□□ 0.74
CLN6-224ENST00000638076 VWA2Q5GFL6 755 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms