RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ERVMER34-1Q9H9K5 563 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 DTX4Q9Y2E6 619 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 J3QRE1 110 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 HLA-DQB1P01920 261 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 MAT1AQ00266 395 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 DUSP8Q13202 625 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 TMEM196Q5HYL7 178 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 FAM209AQ5JX71 171 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 RNF44Q7L0R7 432 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 LINGO2Q7L985 606 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 LNX2Q8N448 690 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 OR9A4Q8NGU2 314 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 FOXN4Q96NZ1 517 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 DPCDQ9BVM2 203 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 TMEM27Q9HBJ8 222 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 KRCC1Q9NPI7 259 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 CMC2Q9NRP2 79 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 EVA1BQ9NVM1 165 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 LYARQ9NX58 379 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 HCN3Q9P1Z3 774 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 A0A1B0GTH9 108 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 CIB4A0PJX0 185 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 ZSCAN5BA6NJL1 495 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 LINC01565O15544 149 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 RCBTB2O95199 551 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 TCRBP04435 133 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF3P17036 446 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 F8A1P23610 371 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 SOX2P48431 317 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 RPL6Q02878 288 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 PLA1AQ53H76 456 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF776Q68DI1 518 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 GAL3ST1Q99999 423 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 PIGUQ9H490 435 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 A0A0G2JK05 382 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 TRBV2A0A0J9YWF9 115 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 MCIDASD6RGH6 385 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 WNT1P04628 370 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 EDNRAP25101 427 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 OR3A3P47888 321 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 RPS15AP62244 130 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 C1orf53Q5VUE5 145 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 FCRL6Q6DN72 434 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 GALNT6Q8NCL4 622 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 LGALS14Q8TCE9 139 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 RERGQ96A58 199 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 RASD2Q96D21 266 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 PGLYRP3Q96LB9 341 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 GON7Q9BXV9 100 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF350Q9GZX5 532 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 SPRTNQ9H040 489 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 POT1Q9NUX5 634 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 OR6C2Q9NZP2 312 aa12.94□□□□□ -0.34
CACNA1A-228ENST00000636610 SLC22A31A6NKX4 558 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 BLOC1S5-TXNDC5H3BN57 136 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 TEX46H3BTG2 121 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 H7C1C5 153 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 NOS1APO75052 506 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 DHFRP00374 187 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 GDI2P50395 445 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF81P51508 661 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 LCN6P62502 163 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 ERVK-25P63136 954 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 SLC36A2Q495M3 483 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 C17orf50Q8WW18 174 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 LMF1Q96S06 567 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 CCDC3Q9BQI4 270 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 KIR3DX1Q9H7L2 352 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 MED17Q9NVC6 651 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 RAD1O60671 282 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 HRGP04196 525 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 DBIP07108 87 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 POU6F2P78424 691 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 EIPR1Q53HC9 387 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 METAP1DQ6UB28 335 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 PIAS4Q8N2W9 510 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 C9orf62Q8N4C0 152 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF511Q8NB15 262 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 DNAAF1Q8NEP3 725 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 CREB3L1Q96BA8 519 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 PELI1Q96FA3 418 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 SPACA7Q96KW9 195 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 TSPAN10Q9H1Z9 355 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 OR10A4Q9H209 315 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 HRASLS2Q9NWW9 162 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 ACTR10Q9NZ32 417 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 COPS3Q9UNS2 423 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 SLC35A3Q9Y2D2 325 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 SLC22A7Q9Y694 548 aa12.93□□□□□ -0.34
CACNA1A-228ENST00000636610 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 ARID1AO14497 2285 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 ADH1BP00325 375 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 IGKV1D-16P01601 117 aa12.92□□□□□ -0.34
CACNA1A-228ENST00000636610 HPXP02790 462 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms