RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RFPL4BQ6ZWI9 263 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 GHDCQ8N2G8 530 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 CT55Q8WUE5 264 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 LRFN5Q96NI6 719 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 ATF6BQ99941 703 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 TEX12Q9BXU0 123 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 AICDAQ9GZX7 198 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 ATP13A2Q9NQ11 1180 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 ACSS1Q9NUB1 689 aaPredicted RBP14.27□□□□□ -0.12
CLN8-209ENST00000635970 PADI1Q9ULC6 663 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 CDH10Q9Y6N8 788 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 USP24Q9UPU5 2620 aa14.27□□□□□ -0.12
CLN8-209ENST00000635970 KDM4EB2RXH2 506 aaPredicted RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 C4orf51C9J302 202 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 SAP18O00422 153 aaKnown RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 HMGN4O00479 90 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 TPD52L2O43399 206 aaKnown RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 AKAP8O43823 692 aaKnown RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 TBX6O95947 436 aaPredicted RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 KLK3P07288 261 aaPredicted RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 LIFP15018 202 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 F8A1P23610 371 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 MMP11P24347 488 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 OR1D4P47884 311 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 ANXA11P50995 505 aaKnown RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 FOXL2P58012 376 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 FABP5Q01469 135 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 PRSS53Q2L4Q9 553 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 BTBD16Q32M84 506 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 FAM69BQ5VUD6 431 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 TNFAIP8L2Q6P589 184 aaPredicted RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 FAM198BQ6UWH4 519 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 PAMR1Q6UXH9 720 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 ZER1Q7Z7L7 766 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 SHISA5Q8N114 240 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 CAMKVQ8NCB2 501 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 OR4K5Q8NGD3 323 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 TEX47Q8TBZ9 253 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 ZNF717Q9BY31 904 aaPredicted RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 KLHL31Q9H511 634 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 SLC22A11Q9NSA0 550 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 NLKQ9UBE8 527 aa14.27□□□□□ -0.13
CLN8-209ENST00000635970 MRPS18BQ9Y676 258 aaKnown RBP14.27□□□□□ -0.13
CLN8-209ENST00000635970 INMT-MINDY4F8WBC2 141 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 RRP8O43159 456 aaKnown RBP14.26□□□□□ -0.13
CLN8-209ENST00000635970 FOXS1O43638 330 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 ICMTO60725 284 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 HK1P19367 917 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 WT1P19544 449 aaPredicted RBP14.26□□□□□ -0.13
CLN8-209ENST00000635970 DLSTP36957 453 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 ATP12AP54707 1039 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 FAM214AQ32MH5 1076 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 ACSM5Q6NUN0 579 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 IDO2Q6ZQW0 420 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 TRILQ7L0X0 811 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 WDR53Q7Z5U6 358 aaPredicted RBP14.26□□□□□ -0.13
CLN8-209ENST00000635970 BCDIN3DQ7Z5W3 292 aaKnown RBP14.26□□□□□ -0.13
CLN8-209ENST00000635970 ARIH2OSQ8N7S6 290 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 POGLUT1Q8NBL1 392 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 ZNF485Q8NCK3 441 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 OR5H6Q8NGV6 325 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 BBS10Q8TAM1 723 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 GNPDA2Q8TDQ7 276 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 GATAD2BQ8WXI9 593 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 PRRC1Q96M27 445 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 JAM3Q9BX67 310 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 DPH1Q9BZG8 443 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 RHBGQ9H310 441 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 PIGUQ9H490 435 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 RANBP3Q9H6Z4 567 aaPredicted RBP14.26□□□□□ -0.13
CLN8-209ENST00000635970 BCL2L10Q9HD36 194 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 MED17Q9NVC6 651 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 FBXW2Q9UKT8 454 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 ING4Q9UNL4 249 aa14.26□□□□□ -0.13
CLN8-209ENST00000635970 A0A0A6YYC8 382 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 WASHC1A8K0Z3 465 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 I3L1I5 382 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 HPGDSO60760 199 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 TCN2P20062 427 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 IFNA8P32881 189 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 MAPK12P53778 367 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 RPS18P62269 152 aaKnown RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 BDH1Q02338 343 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 TLE3Q04726 772 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 SPDYE7PQ495Y7 208 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 MANEAQ5SRI9 462 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 YOD1Q5VVQ6 348 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 TYW3Q6IPR3 259 aaKnown RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 TMEM151BQ8IW70 566 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 IQCF1Q8N6M8 205 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 MORN4Q8NDC4 146 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 ANKK1Q8NFD2 765 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 OR9A4Q8NGU2 314 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 OR52N1Q8NH53 320 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 NT5CQ8TCD5 201 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 UPRTQ96BW1 309 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 KCTD12Q96CX2 325 aaKnown RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 CITED4Q96RK1 184 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 TREX2Q9BQ50 279 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 IL17BQ9UHF5 180 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms