RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-219	ENST00000635917	LRRN3	E7EW58	273 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	NADK	O95544	446 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LDOC1	O95751	146 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	IGHA1	P01876	353 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LIMS3	P0CW19	117 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LIMS4	P0CW20	117 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	IL12B	P29460	328 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLC1A3	P43003	542 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	COPZ1	P61923	177 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LSM3	P62310	102 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	DYNC1I2	Q13409	638 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	MED22	Q15528	200 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	MARCH3	Q86UD3	253 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LRRC17	Q8N6Y2	441 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	OR8K3	Q8NH51	312 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	KISS1R	Q969F8	398 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	RFK	Q969G6	155 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	MND1	Q9BWT6	205 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	JAM3	Q9BX67	310 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	TEX12	Q9BXU0	123 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	RACGAP1	Q9H0H5	632 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CHRNA9	Q9UGM1	479 aa		11.43	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LOC102723996	A0A087X1L8	192 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	IRGM	A1A4Y4	181 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	FAM183A	A6NL82	134 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917		B4DXG7	233 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SOCS6	O14544	535 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CDX4	O14627	284 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	GNB5	O14775	395 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	KHNYN	O15037	678 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	EIF4E2	O60573	245 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CLPX	O76031	633 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	APOL3	O95236	402 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	WISP1	O95388	367 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	TSPAN19	P0C672	248 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	PNMT	P11086	282 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	PEPD	P12955	493 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLC2A5	P22732	501 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CCKBR	P32239	447 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	UGT2B10	P36537	528 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLC9A3	P48764	834 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	NIPAL3	Q6P499	406 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	FAM198B	Q6UWH4	519 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CXXC5	Q7LFL8	322 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	NUP54	Q7Z3B4	507 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	TM9SF4	Q92544	642 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SGTB	Q96EQ0	304 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	VMP1	Q96GC9	406 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	DDO	Q99489	341 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	OR51E2	Q9H255	320 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	OSGIN1	Q9UJX0	560 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	BAIAP2	Q9UQB8	552 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	NPFFR2	Q9Y5X5	522 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	FREM2	Q5SZK8	3169 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	GTPBP1	O00178	669 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CCRL2	O00421	344 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	FLRT2	O43155	660 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	AIRE	O43918	545 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	PPM1B	O75688	479 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	KLF7	O75840	302 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	EVI2B	P34910	448 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLC6A8	P48029	635 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLC26A5	P58743	744 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	MLLT11	Q13015	90 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	TOMM34	Q15785	309 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	TST	Q16762	297 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLC35F1	Q5T1Q4	408 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	PLBD1	Q6P4A8	553 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LYPD8	Q6UX82	237 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	METTL21A	Q8WXB1	218 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	HGD	Q93099	445 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	PLEKHA8	Q96JA3	519 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	GPX7	Q96SL4	187 aa	Predicted RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CRB3	Q9BUF7	120 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	IFT27	Q9BW83	186 aa		11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLIRP	Q9GZT3	109 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CCDC182	A6NF36	153 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	MCIDAS	D6RGH6	385 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	NDUFB5	O43674	189 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	OR7A10	O76100	309 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	DKK1	O94907	266 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	NDUFB2	O95178	105 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	PPP1R3D	O95685	299 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	ASAH2B	P0C7U1	165 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	HSMCR30	P0CW71	290 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	CD59	P13987	128 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	NOS3	P29474	1203 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	SLC6A6	P31641	620 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	ENTPD1	P49961	510 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LTB	Q06643	244 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	DBP	Q10586	325 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	ITGAD	Q13349	1161 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	ZNF74	Q16587	644 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	FAM69B	Q5VUD6	431 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	LINC00299	Q6ZSB3	139 aa		11.41	□□□□□ -0.58
CACNA1A-219	ENST00000635917	MEPCE	Q7L2J0	689 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms