RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 DSN1Q9H410 356 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 ZBTB20Q9HC78 741 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 MEPEQ9NQ76 525 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 EXOSC3Q9NQT5 275 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 C20orf141Q9NUB4 165 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF226Q9NYT6 803 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 SELENONQ9NZV5 590 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 MYOTQ9UBF9 498 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 PLEKHB1Q9UF11 243 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 BLOC1S6Q9UL45 172 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 TCFL5Q9UL49 500 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 RNF6Q9Y252 685 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 FARSAQ9Y285 508 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 HRH3Q9Y5N1 445 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 ALG1L2C9J202 215 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 K7EM74 188 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 NDUFB5O43674 189 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 SMNDC1O75940 238 aaKnown RBP eCLIP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 CLPTM1O96005 669 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 LINGO3P0C6S8 592 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 NAGAP17050 411 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 EVI2BP34910 448 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 IDH2P48735 452 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 CCR4P51679 360 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 FXYD6P3P58550 94 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 CDC42P60953 191 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 ALDH6A1Q02252 535 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF117Q03924 483 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 TSPAN31Q12999 210 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 SMN1Q16637 294 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 ALG10BQ5I7T1 473 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 RBM48Q5RL73 367 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 PLAG1Q6DJT9 500 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 ULK3Q6PHR2 472 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 PPP1R32Q7Z5V6 425 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 OR8D4Q8NGM9 314 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 PFN4Q8NHR9 129 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 FAM81AQ8TBF8 368 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC22A8Q8TCC7 542 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 HGDQ93099 445 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 MPP4Q96JB8 637 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 HS6ST2Q96MM7 605 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 RHNO1Q9BSD3 238 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 IMPAD1Q9NX62 359 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 CARD8Q9Y2G2 431 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 NBASA2RRP1 2371 aa8.66□□□□□ -1.02
PDLIM5-223ENST00000627587 NSG1A0A0A6YYJ2 146 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC1A7O00341 560 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 HCRTR2O43614 444 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 MAN1A2O60476 641 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 OR6B1O95007 311 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 ANGPTL1O95841 491 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 ATP6V1B1P15313 513 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 FUT1P19526 365 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 MAKP20794 623 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 FPR3P25089 353 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 GPR4P46093 362 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 SLC6A8P48029 635 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 FBXW4P57775 412 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 TOP3AQ13472 1001 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 FHL1Q13642 323 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 SSPNQ14714 243 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 C12orf73Q69YU5 71 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 NDUFAF7Q7L592 441 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 MARCH3Q86UD3 253 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 M1APQ8TC57 530 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 DNAJA4Q8WW22 397 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 ZNF566Q969W8 418 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 TMCO6Q96DC7 493 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 NODALQ96S42 347 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 LAT2Q9GZY6 243 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 EGLN3Q9H6Z9 239 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 MMP25Q9NPA2 562 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 ATP13A2Q9NQ11 1180 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 RASSF1Q9NS23 344 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 MED31Q9Y3C7 131 aa8.65□□□□□ -1.02
PDLIM5-223ENST00000627587 A0A087WXM4 84 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 ENO4A6NNW6 628 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 SCO2O43819 266 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 EIF4E2O60573 245 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 OR2J2O76002 312 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 GNLYP22749 145 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 EEF1B2P24534 225 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 FMO3P31513 532 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 OTX2P32243 289 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 RBM34P42696 430 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 GAS1P54826 345 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 EFNB1P98172 346 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 CDK5Q00535 292 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 Q0VFX4 171 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 SLX4IPQ5VYV7 408 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 WBP2NLQ6ICG8 309 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 RASSF6Q6ZTQ3 369 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 P3H2Q8IVL5 708 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 MISPQ8IVT2 679 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 CDK20Q8IZL9 346 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC15A4Q8N697 577 aa8.64□□□□□ -1.03
PDLIM5-223ENST00000627587 IQCF1Q8N6M8 205 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms