RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZNF100Q8IYN0 542 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 LRRC75A-AS1Q8N1F1 130 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 WFDC11Q8NEX6 87 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 OR9I1Q8NGQ6 314 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 LRRC8CQ8TDW0 803 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 HSD17B8Q92506 261 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 KISS1RQ969F8 398 aaPredicted RBP9.62□□□□□ -0.87
SSBP4-215ENST00000625926 VPS33AQ96AX1 596 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
SSBP4-215ENST00000625926 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 ATP6V1G3Q96LB4 118 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 CCL19Q99731 98 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 NGBQ9NPG2 151 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 SLC6A13Q9NSD5 602 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 THUMPD1Q9NXG2 353 aaKnown RBP9.62□□□□□ -0.87
SSBP4-215ENST00000625926 EMC3Q9P0I2 261 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 P2RX2Q9UBL9 471 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 PRDM4Q9UKN5 801 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 TRAPPC4Q9Y296 219 aa9.62□□□□□ -0.87
SSBP4-215ENST00000625926 INTS1Q8N201 2190 aaKnown RBP9.62□□□□□ -0.87
SSBP4-215ENST00000625926 ANKHD1Q8IWZ3 2542 aaKnown RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 IGKV3D-15A0A087WSY6 115 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TMED7-TICAM2A0A0A6YYA0 188 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TMEM247A6NEH6 219 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 AP3D1O14617 1153 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 POLR3GO15318 223 aaPredicted RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF208O43345 1280 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 DNPH1O43598 174 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 CNOT4O95628 575 aaKnown RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TFPTP0C1Z6 253 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ETFAP13804 333 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TACR3P29371 465 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 MRPL19P49406 292 aaKnown RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 POLR2HP52434 150 aaKnown RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 DSTNP60981 165 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 STX1BP61266 288 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TSC22D1Q15714 1073 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TAB1Q15750 504 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 MAPK11Q15759 364 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ZSWIM7Q19AV6 140 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 LIN52Q52LA3 116 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 MRPL2Q5T653 305 aaKnown RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF704Q6ZNC4 412 aaPredicted RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 BHLHA15Q7RTS1 189 aaPredicted RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF440Q8IYI8 595 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 OR52P1PQ8NH57 321 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 SLC38A5Q8WUX1 472 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 DDIT4LQ96D03 193 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ARL5BQ96KC2 179 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF300Q96RE9 604 aaPredicted RBP9.61□□□□□ -0.87
SSBP4-215ENST00000625926 OR11A1Q9GZK7 315 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TCF7L2Q9NQB0 619 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 DLL4Q9NR61 685 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TMEM181Q9P2C4 612 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 PRSS50Q9UI38 385 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 OSGIN1Q9UJX0 560 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF232Q9UNY5 417 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 TMED7Q9Y3B3 224 aa9.61□□□□□ -0.87
SSBP4-215ENST00000625926 MED12Q93074 2177 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 A0A0G2JPF8 293 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 TMEM72A0PK05 275 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 CDHR4A6H8M9 788 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF716A6NP11 495 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 HNRNPCL2B2RXH8 293 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 HNRNPCL3B7ZW38 293 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 GPR171O14626 319 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 EIF1BO60739 113 aaKnown RBP9.6□□□□□ -0.87
SSBP4-215ENST00000625926 HNRNPCL1O60812 293 aaKnown RBP9.6□□□□□ -0.87
SSBP4-215ENST00000625926 BCHEP06276 602 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 HNRNPCL4P0DMR1 293 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 IDH3AP50213 366 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 OR2B6P58173 313 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 COPZ1P61923 177 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 SLC35A1P78382 337 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 EPS8Q12929 822 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 CAPRIN1Q14444 709 aaKnown RBP9.6□□□□□ -0.87
SSBP4-215ENST00000625926 LARS2Q15031 903 aaKnown RBP9.6□□□□□ -0.87
SSBP4-215ENST00000625926 RGNQ15493 299 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 GTDC1Q4AE62 458 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 FBXW9Q5XUX1 488 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 ABLIM2Q6H8Q1 611 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 SLC2A7Q6PXP3 512 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 ZNF836Q6ZNA1 936 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 VRK2Q86Y07 508 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 GOLGA6L1Q8N7Z2 621 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 PIGXQ8TBF5 258 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 DYDC1Q8WWB3 177 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 GTF2H4Q92759 462 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 DNAJA3Q96EY1 480 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 AURKBQ96GD4 344 aaPredicted RBP9.6□□□□□ -0.87
SSBP4-215ENST00000625926 TMEM204Q9BSN7 226 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 CCDC28BQ9BUN5 200 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 POTEKPQ9BYX7 375 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 ADAM19Q9H013 955 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 RAD21L1Q9H4I0 556 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 ARMC7Q9H6L4 198 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 ESRP2Q9H6T0 727 aaKnown RBP9.6□□□□□ -0.87
SSBP4-215ENST00000625926 CACYBPQ9HB71 228 aaKnown RBP9.6□□□□□ -0.87
SSBP4-215ENST00000625926 SLCO1B3Q9NPD5 702 aa9.6□□□□□ -0.87
SSBP4-215ENST00000625926 RLIMQ9NVW2 624 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms