RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ATF1P18846 271 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 SHHQ15465 462 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 ALG10BQ5I7T1 473 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 ZCCHC12Q6PEW1 402 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 MS4A15Q8N5U1 240 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 OR4N2Q8NGD1 307 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 OR4K13Q8NH42 304 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 THAP4Q8WY91 577 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 CITED4Q96RK1 184 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
VARS2-213ENST00000625423 PRDM9Q9NQV7 894 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 HAO2Q9NYQ3 351 aa10.38□□□□□ -0.75
VARS2-213ENST00000625423 A0A1W2PQF6 199 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 TSC22D2O75157 780 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 CBX7O95931 251 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 AK1P00568 194 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 HIST1H1CP16403 213 aaKnown RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 SLC6A6P31641 620 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 ACTC1P68032 377 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 ACTA1P68133 377 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 DGCR2P98153 550 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 ANKRD54Q6NXT1 300 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 CREB3L2Q70SY1 520 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 TOMM5Q8N4H5 51 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 FAM98AQ8NCA5 519 aaKnown RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 HYLS1Q96M11 299 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 DPAGT1Q9H3H5 408 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 BRD7Q9NPI1 651 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 NDUFB5O43674 189 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 IFNGP01579 166 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 HOXB2P14652 356 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 ACAA2P42765 397 aaKnown RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 TNFRSF4P43489 277 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 GDI2P50395 445 aaKnown RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 TMEM31Q5JXX7 168 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 MTFR2Q6P444 385 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 ARHGAP11AQ6P4F7 1023 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SIAH3Q8IW03 269 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SFTPA2Q8IWL1 248 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 TIGD4Q8IY51 512 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 CA13Q8N1Q1 262 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 LRRC17Q8N6Y2 441 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 OR11H7Q8NGC8 314 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 YIPF5Q969M3 257 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 ANKRD9Q96BM1 317 aaPredicted RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 CTHRC1Q96CG8 243 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SCMH1Q96GD3 660 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 GHITMQ9H3K2 345 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SLC23A1Q9UHI7 598 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 ZNF222Q9UK12 451 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 FBXL21Q9UKT6 434 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 BAIAP2Q9UQB8 552 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 NPFFR2Q9Y5X5 522 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 LRRN3E7EW58 273 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 GALR3O60755 368 aaPredicted RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 NKX2-2O95096 273 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 TCRBP04435 133 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 GIFP27352 417 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 POU4F2Q12837 409 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SRSF5Q13243 272 aaKnown RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 C9orf62Q8N4C0 152 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 TEX19Q8NA77 164 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SLC2A12Q8TD20 617 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 PELI1Q96FA3 418 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 SIPA1Q96FS4 1042 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 GSDMCQ9BYG8 508 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 LRRN3Q9H3W5 708 aa10.37□□□□□ -0.75
VARS2-213ENST00000625423 DNAJB12Q9NXW2 375 aaKnown RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 AK6Q9Y3D8 172 aaKnown RBP10.37□□□□□ -0.75
VARS2-213ENST00000625423 IGKV1D-16P01601 117 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 HOXC4P09017 264 aaPredicted RBP10.36□□□□□ -0.75
VARS2-213ENST00000625423 EPXP11678 715 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 STOMP27105 288 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 CCR6P51684 374 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 VSX2P58304 361 aaPredicted RBP10.36□□□□□ -0.75
VARS2-213ENST00000625423 PSG6Q00889 435 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 GABRG3Q99928 467 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 ORAI3Q9BRQ5 295 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 ZNF426Q9BUY5 554 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 RBCK1Q9BYM8 510 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 IER3IP1Q9Y5U9 82 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 SZT2Q5T011 3432 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 TEX13CA0A0J9YWL9 993 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 C7orf66A4D0T2 115 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 FLRT2O43155 660 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 HCRTR1O43613 425 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 OR10H2O60403 315 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 UBL3O95164 117 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 KLF8O95600 359 aaPredicted RBP10.36□□□□□ -0.75
VARS2-213ENST00000625423 SYPP08247 313 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 TFF2Q03403 129 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 FAM53BQ14153 422 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 CDK5R1Q15078 307 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 CLPPQ16740 277 aaPredicted RBP10.36□□□□□ -0.75
VARS2-213ENST00000625423 CEP78Q5JTW2 689 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 PRSS45Q7RTY3 260 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 IZUMO1Q8IYV9 350 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms