RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SLITRK5O94991 958 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 KCNK2O95069 426 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 NKX2-2O95096 273 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 WNT11O96014 354 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 CRYAAP02489 173 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 GSTA1P08263 222 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 ADRA2AP08913 450 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 CHN1P15882 459 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 TAC1P20366 129 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 COL8A2P25067 703 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 FPR2P25090 351 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 CALCRP30988 508 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 THBS4P35443 961 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 CCT5P48643 541 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 DIO1P49895 249 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 HEPACAMQ14CZ8 416 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 HIKESHIQ53FT3 197 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 METTL2BQ6P1Q9 378 aaKnown RBP11.98□□□□□ -0.49
SNX1-214ENST00000625244 LEG1Q6P5S2 330 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 SPATA21Q7Z572 469 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 CDK20Q8IZL9 346 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 PTGR2Q8N8N7 351 aaPredicted RBP11.98□□□□□ -0.49
SNX1-214ENST00000625244 SLC16A11Q8NCK7 471 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 PHOSPHO1Q8TCT1 267 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 GPR119Q8TDV5 335 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 DVL3Q92997 716 aaPredicted RBP11.98□□□□□ -0.49
SNX1-214ENST00000625244 MRPL57Q9BQC6 102 aaKnown RBP11.98□□□□□ -0.49
SNX1-214ENST00000625244 KATNB1Q9BVA0 655 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 MRPL46Q9H2W6 279 aaKnown RBP11.98□□□□□ -0.49
SNX1-214ENST00000625244 CENPHQ9H3R5 247 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 DYNLRB1Q9NP97 96 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 NMRK1Q9NWW6 199 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 DCDC2Q9UHG0 476 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 PCTPQ9UKL6 214 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 CARD8Q9Y2G2 431 aa11.98□□□□□ -0.49
SNX1-214ENST00000625244 A0A0G2JMP0 313 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 A0A0X1KG70 313 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 TTC36A6NLP5 189 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 PPP6CO00743 305 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 COPEO14579 308 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 FSHBP01225 129 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 MYBPC1Q00872 1141 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 NAAAQ02083 359 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 HGFACQ04756 655 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 ZP4Q12836 540 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 NDUFAF6Q330K2 333 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 TECRLQ5HYJ1 363 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 CEP85LQ5SZL2 805 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 LETMD1Q6P1Q0 360 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 KLHL24Q6TFL4 600 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 RBMS3Q6XE24 437 aaKnown RBP11.97□□□□□ -0.49
SNX1-214ENST00000625244 RPS27LQ71UM5 84 aaKnown RBP11.97□□□□□ -0.49
SNX1-214ENST00000625244 OR4M2Q8NGB6 313 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 CEP70Q8NHQ1 597 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 FBXO30Q8TB52 745 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 PHF21BQ96EK2 531 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 AMDHD1Q96NU7 426 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 CCT8L2Q96SF2 557 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 TMEM109Q9BVC6 243 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 SEC61A2Q9H9S3 476 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNX1-214ENST00000625244 SLC7A10Q9NS82 523 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 UPB1Q9UBR1 384 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 LGALS13Q9UHV8 139 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 ACTL7BQ9Y614 415 aa11.97□□□□□ -0.49
SNX1-214ENST00000625244 PLPP2O43688 288 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 KRT4P19013 534 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 CDH2P19022 906 aaPredicted RBP11.96□□□□□ -0.49
SNX1-214ENST00000625244 NPR2P20594 1047 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 DDCP20711 480 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 P2RX1P51575 399 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 TGFBR3Q03167 851 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 SLC25A53Q5H9E4 307 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 BEND6Q5SZJ8 279 aaPredicted RBP11.96□□□□□ -0.49
SNX1-214ENST00000625244 CCNJQ5T5M9 372 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 ANKRD16Q6P6B7 361 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 GALNT18Q6P9A2 607 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 LRIG3Q6UXM1 1119 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 CASP12Q6UXS9 341 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 TMPPEQ6ZT21 453 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 MTDHQ86UE4 582 aaKnown RBP11.96□□□□□ -0.49
SNX1-214ENST00000625244 CCDC63Q8NA47 563 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 SYT14Q8NB59 555 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 NUP37Q8NFH4 326 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 OR6Y1Q8NGX8 325 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 CKAP2Q8WWK9 683 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 ZIM3Q96PE6 472 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 EBPLQ9BY08 206 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 OPN4Q9UHM6 478 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 MID2Q9UJV3 735 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 GRID1Q9ULK0 1009 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 SNX6Q9UNH7 406 aa11.96□□□□□ -0.49
SNX1-214ENST00000625244 RYR2Q92736 4967 aa11.96□□□□□ -0.5
SNX1-214ENST00000625244 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 A0A1W2PPM1 405 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 SULT2B1O00204 365 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 MPZL1O95297 269 aa11.95□□□□□ -0.5
SNX1-214ENST00000625244 HPXP02790 462 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms