RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR1E2P47887 323 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 PTDSS1P48651 473 aaKnown RBP11.42□□□□□ -0.58
PNKP-217ENST00000625216 RNF144AP50876 292 aaPredicted RBP11.42□□□□□ -0.58
PNKP-217ENST00000625216 EEF1A1P68104 462 aaKnown RBP11.42□□□□□ -0.58
PNKP-217ENST00000625216 PLAURQ03405 335 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 GANABQ14697 944 aaKnown RBP11.42□□□□□ -0.58
PNKP-217ENST00000625216 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.42□□□□□ -0.58
PNKP-217ENST00000625216 FBXL19-AS1Q494R0 122 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 OGFRL1Q5TC84 451 aaPredicted RBP11.42□□□□□ -0.58
PNKP-217ENST00000625216 EEF1A1P5Q5VTE0 462 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 AP1ARQ63HQ0 302 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 ARSKQ6UWY0 536 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 ZNF836Q6ZNA1 936 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 CARM1Q86X55 608 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 FADS6Q8N9I5 356 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 OR52P1PQ8NH57 321 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 ZFP3Q96NJ6 502 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 TM9SF2Q99805 663 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 ZNF559Q9BR84 538 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 SPATA5L1Q9BVQ7 753 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 PINK1Q9BXM7 581 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 PTGES2Q9H7Z7 377 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 YY1AP1Q9H869 796 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 NTN4Q9HB63 628 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 PPP4R1LQ9P1A2 415 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 DKKL1Q9UK85 242 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 FBXL2Q9UKC9 423 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 BAG5Q9UL15 447 aa11.42□□□□□ -0.58
PNKP-217ENST00000625216 TACC2O95359 2948 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 CLDN24A6NM45 220 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 CLOCKO15516 846 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 ZIC3O60481 467 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 BCAS1O75363 584 aaPredicted RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 DEAF1O75398 565 aaPredicted RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 UGT2B17O75795 530 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 CST1P01037 141 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 THBS1P07996 1170 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 HOXB6P17509 224 aaKnown RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 BMP5P22003 454 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 LCN1P31025 176 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 PRKAR1BP31321 381 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 ASCL1P50553 236 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 C17orf67Q0P5P2 114 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 NRF1Q16656 503 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 GLYR1Q49A26 553 aaPredicted RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 FLYWCH1Q4VC44 716 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 ZNF311Q5JNZ3 666 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 DCST1Q5T197 706 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 OR5M10Q6IEU7 315 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 POMZP3Q6PJE2 187 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 PIWIL3Q7Z3Z3 882 aaKnown RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 ADGRE4PQ86SQ3 457 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 RBM45Q8IUH3 476 aaKnown RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 PEX5LQ8IYB4 626 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 NAXEQ8NCW5 288 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 ICA1LQ8NDH6 482 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 VANGL1Q8TAA9 524 aaPredicted RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 RASSF5Q8WWW0 418 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 PROX1Q92786 737 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 RNASE6Q93091 150 aaKnown RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 WNT2BQ93097 391 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 SFXN2Q96NB2 322 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 ARHGDIGQ99819 225 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 AMBRA1Q9C0C7 1298 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 DSN1Q9H410 356 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 MTHFD2LQ9H903 347 aaPredicted RBP11.41□□□□□ -0.58
PNKP-217ENST00000625216 FLRT3Q9NZU0 649 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 NDUFAF4Q9P032 175 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 SH3GLB1Q9Y371 365 aa11.41□□□□□ -0.58
PNKP-217ENST00000625216 IGLV3-32A0A0A0MS00 114 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 J3KTA2 159 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 FRS3O43559 492 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 SCO2O43819 266 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 RCBTB2O95199 551 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 UTS2O95399 124 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 LGI1O95970 557 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 DBIP07108 87 aaKnown RBP11.4□□□□□ -0.58
PNKP-217ENST00000625216 NGFRP08138 427 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 PEPDP12955 493 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 NID1P14543 1247 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 ZNF708P17019 499 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 VHLP40337 213 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 LHX2P50458 406 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 ZNF136P52737 540 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 IST1P53990 364 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 DLX5P56178 289 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 MYBPHQ13203 477 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 NPTX1Q15818 432 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 ZNF141Q15928 474 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 LRRC36Q1X8D7 754 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 LIN52Q52LA3 116 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 PDZK1Q5T2W1 519 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 OR2T5Q6IEZ7 315 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 TMEM179BQ7Z7N9 219 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 TSPYL5Q86VY4 417 aaPredicted RBP11.4□□□□□ -0.58
PNKP-217ENST00000625216 CLIP4Q8N3C7 705 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 RELL2Q8NC24 303 aaPredicted RBP11.4□□□□□ -0.58
PNKP-217ENST00000625216 OR2M3Q8NG83 312 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 OR2T29Q8NH02 315 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms