RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 OBP2BQ9NPH6 170 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 DNAJB11Q9UBS4 358 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 A0A087WXM4 84 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 A8MVM7 634 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 KHDRBS3O75525 346 aaKnown RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 KCNK2O95069 426 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 TP53P04637 393 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 PRR35P0CG20 571 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 ARAFP10398 606 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 CALRP27797 417 aaKnown RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 CRABP1P29762 137 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 RHDQ02161 417 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 GLO1Q04760 184 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 CPZQ66K79 652 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 TUBB1Q9H4B7 451 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 TESQ9UGI8 421 aaKnown RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 IGHV3-15A0A0B4J1V0 119 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 KDM4EB2RXH2 506 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 FCMRO60667 390 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 CRYAAP02489 173 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 HTR1AP08908 422 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 PCGF2P35227 344 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 BIDP55957 195 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 ELF3P78545 371 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 SLC3A1Q07837 685 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 RUNDC3AQ59EK9 446 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 MTFR2Q6P444 385 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 UXS1Q8NBZ7 420 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 OR4N2Q8NGD1 307 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 HMGCLL1Q8TB92 370 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 ROBO4Q8WZ75 1007 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 SPTSSAQ969W0 71 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 NEURL3Q96EH8 262 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 PRR14Q9BWN1 585 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 C20orf27Q9GZN8 174 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 CMTM6Q9NX76 183 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 PAQR5Q9NXK6 330 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM14AQ9Y6G1 99 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 ANKUB1A6NFN9 424 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 TVP23AA6NH52 213 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 MASP2O00187 686 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 NME4O00746 187 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 HSPA12AO43301 675 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 WNT11O96014 354 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PPP2R2BQ00005 443 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 VEZF1Q14119 521 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 COX20Q5RI15 118 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 CD163Q86VB7 1156 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 SPACA3Q8IXA5 215 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 TRMT10AQ8TBZ6 339 aaKnown RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 STACQ99469 402 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 EMC6Q9BV81 110 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 POLR2J2Q9GZM3 115 aaKnown RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 ABCG2Q9UNQ0 655 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 B3GNT3Q9Y2A9 372 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 SNPHO15079 494 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 RGS10O43665 173 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 TNFAIP8O95379 198 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 ABHD16AO95870 558 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 NBL1P41271 181 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 SLC1A3P43003 542 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 SELENBP1Q13228 472 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 SLC35A4Q96G79 324 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 RASL10BQ96S79 203 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 FEVQ99581 238 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 TTYH2Q9BSA4 534 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 COQ10BQ9H8M1 238 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF229Q9UJW7 825 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 CORINQ9Y5Q5 1042 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 MAGED1Q9Y5V3 778 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 KCNE1BA0A087WTH5 132 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PTHP01270 115 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 HTR5AP47898 357 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PTDSS1P48651 473 aaKnown RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 HLCSP50747 726 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PMP22Q01453 160 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 ARFRP1Q13795 201 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 MELKQ14680 651 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 GXYLT1Q4G148 440 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 C1orf140Q5VVS0 124 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 OR2A2Q6IF42 318 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 SDR9C7Q8NEX9 313 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 ACOT11Q8WXI4 607 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 WDR54Q9H977 334 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PCDHGB1Q9Y5G3 927 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 A0A1B0GTL3 188 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 FRG2CA6NGY1 282 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PLOD3O60568 738 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 DBTP11182 482 aaKnown RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PSMA1P25786 263 aaKnown RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 S100GP29377 79 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 AQP2P41181 271 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PCBD1P61457 104 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 KLRB1Q12918 225 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 EIF2S3LQ2VIR3 472 aaKnown RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 COQ5Q5HYK3 327 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 BICRALQ6AI39 1079 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 TIGD3Q6B0B8 471 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PLEKHG7Q6ZR37 379 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms