RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 VGLL3A8MV65 326 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 SHISA8B8ZZ34 492 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 KPNA4O00629 521 aaPredicted RBP16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 PIP5K1CO60331 668 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 WISP1O95388 367 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 ALPLP05186 524 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 ANXA8P13928 327 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 HK1P19367 917 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 ALDH3A2P51648 485 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 CHN2P52757 468 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 PPP2R2BQ00005 443 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 ZNF770Q6IQ21 691 aaPredicted RBP16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 FAHD1Q6P587 224 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 IGFL3Q6UXB1 125 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 P3H2Q8IVL5 708 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 NRMQ8IXM6 262 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 SLC39A7Q92504 469 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 MRGPRX4Q96LA9 322 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 NPAS1Q99742 590 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 PSD2Q9BQI7 771 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 ZNF426Q9BUY5 554 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 MED31Q9Y3C7 131 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 CACNA1GO43497 2377 aa16.15■□□□□ 0.18
PTCHD3-202ENST00000622555 TMED7-TICAM2A0A0A6YYA0 188 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 HPRP00739 348 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 RFPL3SP0C7P2 107 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 POU2F1P14859 743 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 GDF1P27539 372 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 IFNGR2P38484 337 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 RFC3P40938 356 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 DAPP51397 102 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PLGLB1Q02325 96 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PGBD2Q6P3X8 592 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PRICKLE2Q7Z3G6 844 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 RNF113BQ8IZP6 322 aaKnown RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PFN4Q8NHR9 129 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 GTPBP3Q969Y2 492 aaKnown RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 ZBTB8AQ96BR9 441 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 DTNBP1Q96EV8 351 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 KRCC1Q9NPI7 259 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 USE1Q9NZ43 259 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 B4GALT7Q9UBV7 327 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 TMED7Q9Y3B3 224 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PCDHGB6Q9Y5F9 930 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 LOC400499M0QZD8 3231 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 ETV2O00321 342 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 SUSD5O60279 629 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 GASTP01350 101 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PDGFAP04085 211 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 ITGB2P05107 769 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 CBLP22681 906 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 IGFBP5P24593 272 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 SRD5A2P31213 254 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 APOBEC1P41238 236 aaKnown RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 EIF1P41567 113 aaKnown RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 DLX5P56178 289 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 IL1RL1Q01638 556 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 SLC25A53Q5H9E4 307 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 MEX3DQ86XN8 651 aaKnown RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 ADGRG3Q86Y34 549 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 CHERPQ8IWX8 916 aaKnown RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 OR5M1Q8NGP8 315 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 POC1BQ8TC44 478 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 TTTY12Q9BZ98 90 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 ZNF556Q9HAH1 456 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 MGAT4BQ9UQ53 548 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 RPH3AQ9Y2J0 694 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 PCDHGB7Q9Y5F8 929 aa16.14■□□□□ 0.17
PTCHD3-202ENST00000622555 CFAP47Q6ZTR5 3102 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 IGKV1D-42A0A075B6H8 117 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 TMEM72A0PK05 275 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 DLGAP1O14490 977 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 TRAPPC6AO75865 159 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 ADAP00813 363 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 IFI30P13284 250 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 FOXK1P85037 733 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 NHSL2Q5HYW2 709 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 C6orf52Q5T4I8 152 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 KDM4DQ6B0I6 523 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 ZER1Q7Z7L7 766 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 GALNT5Q7Z7M9 940 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 ABHD17AQ96GS6 310 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 FAM46AQ96IP4 442 aaKnown RBP16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 NIPSNAP1Q9BPW8 284 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 TMEM43Q9BTV4 400 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 UBQLN3Q9H347 655 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 CXorf56Q9H5V9 222 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 MEPEQ9NQ76 525 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 KRT84Q9NSB2 600 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 C20orf141Q9NUB4 165 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 TMEFF2Q9UIK5 374 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 ORC6Q9Y5N6 252 aa16.13■□□□□ 0.17
PTCHD3-202ENST00000622555 MED12Q93074 2177 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 FAM166BA8MTA8 275 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 K7EM74 188 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 ZIC3O60481 467 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 MITFO75030 526 aaPredicted RBP16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 GPR4P46093 362 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 OMPP47874 163 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms