RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 ZNF440Q8IYI8 595 aa22.38■■□□□ 1.17
VEGFA-229ENST00000621747 DYDC1Q8WWB3 177 aa22.38■■□□□ 1.17
VEGFA-229ENST00000621747 KISS1RQ969F8 398 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF300Q96RE9 604 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-229ENST00000621747 CCL19Q99731 98 aa22.38■■□□□ 1.17
VEGFA-229ENST00000621747 USB1Q9BQ65 265 aaKnown RBP22.38■■□□□ 1.17
VEGFA-229ENST00000621747 EMC3Q9P0I2 261 aa22.38■■□□□ 1.17
VEGFA-229ENST00000621747 CFAP73A6NFT4 308 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 BCHEP06276 602 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 MRPL19P49406 292 aaKnown RBP22.37■■□□□ 1.17
VEGFA-229ENST00000621747 ITGADQ13349 1161 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 PDK3Q15120 406 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 GTDC1Q4AE62 458 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 LIN52Q52LA3 116 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 ABLIM2Q6H8Q1 611 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 Q6ZT83 130 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 GALNT5Q7Z7M9 940 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 GOLGA6L1Q8N7Z2 621 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 DDIT4LQ96D03 193 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 PLPPR2Q96GM1 343 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 CACYBPQ9HB71 228 aaKnown RBP22.37■■□□□ 1.17
VEGFA-229ENST00000621747 SLCO1B3Q9NPD5 702 aa22.37■■□□□ 1.17
VEGFA-229ENST00000621747 TMED7-TICAM2A0A0A6YYA0 188 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF814B7Z6K7 855 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 SMPD2O60906 423 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 CCNA2P20248 432 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 HOXC12P31275 282 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 SLC1A3P43003 542 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 MAP2K6P52564 334 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 NKX6-1P78426 367 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-229ENST00000621747 EPS8Q12929 822 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 MAPK11Q15759 364 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 TTMPQ5BVD1 217 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 SHEQ5VZ18 495 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF704Q6ZNC4 412 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-229ENST00000621747 OR52P1PQ8NH57 321 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 PIGXQ8TBF5 258 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 SLC38A5Q8WUX1 472 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 HSD17B8Q92506 261 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 GTF2H4Q92759 462 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF775Q96BV0 537 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-229ENST00000621747 AURKBQ96GD4 344 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-229ENST00000621747 ARL5BQ96KC2 179 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 OR11A1Q9GZK7 315 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 RAD21L1Q9H4I0 556 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 NGBQ9NPG2 151 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 OSGIN1Q9UJX0 560 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 PRDM4Q9UKN5 801 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 TMED7Q9Y3B3 224 aa22.36■■□□□ 1.17
VEGFA-229ENST00000621747 DSPPQ9NZW4 1301 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF469Q96JG9 3925 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-229ENST00000621747 IGKV3D-15A0A087WSY6 115 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 ARHGEF9O43307 516 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF208O43345 1280 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 TFPTP0C1Z6 253 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 TACR3P29371 465 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 OR2B6P58173 313 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 TSC22D1Q15714 1073 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 ZSWIM7Q19AV6 140 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 ALKBH2Q6NS38 261 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF100Q8IYN0 542 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 LRRC75A-AS1Q8N1F1 130 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 WFDC11Q8NEX6 87 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 CCDC28BQ9BUN5 200 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 TMEM181Q9P2C4 612 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 PRSS50Q9UI38 385 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 TRAPPC4Q9Y296 219 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 PCDHB14Q9Y5E9 798 aa22.35■■□□□ 1.17
VEGFA-229ENST00000621747 CDHR4A6H8M9 788 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 CNOT4O95628 575 aaKnown RBP22.34■■□□□ 1.17
VEGFA-229ENST00000621747 FOSL1P15407 271 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 IDH3AP50213 366 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 LARS2Q15031 903 aaKnown RBP22.34■■□□□ 1.17
VEGFA-229ENST00000621747 SLC2A7Q6PXP3 512 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 BHLHA15Q7RTS1 189 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-229ENST00000621747 VRK2Q86Y07 508 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 P3H2Q8IVL5 708 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 DNAJA3Q96EY1 480 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 TMEM19Q96HH6 336 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 POTEKPQ9BYX7 375 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 PAIP1Q9H074 479 aaKnown RBP22.34■■□□□ 1.17
VEGFA-229ENST00000621747 ARMC7Q9H6L4 198 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 RLIMQ9NVW2 624 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF232Q9UNY5 417 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF443Q9Y2A4 671 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-229ENST00000621747 ITPR3Q14573 2671 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 VPS13CQ709C8 3753 aa22.34■■□□□ 1.17
VEGFA-229ENST00000621747 A0A0G2JPF8 293 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 TMEM72A0PK05 275 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 HNRNPCL2B2RXH8 293 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 HNRNPCL3B7ZW38 293 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 GPR171O14626 319 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 HNRNPCL1O60812 293 aaKnown RBP22.33■■□□□ 1.17
VEGFA-229ENST00000621747 THBS1P07996 1170 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 HNRNPCL4P0DMR1 293 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 FADDQ13158 208 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 RNF220Q5VTB9 566 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 ZNF836Q6ZNA1 936 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 HDXQ7Z353 690 aa22.33■■□□□ 1.17
VEGFA-229ENST00000621747 EBF4Q9BQW3 602 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms