RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PADI1Q9ULC6 663 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 PTPRQQ9UMZ3 2332 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 A0A1W2PRQ8 180 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 HCN1O60741 890 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 SEC14L2O76054 403 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 NADKO95544 446 aaPredicted RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 OMPP47874 163 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 ETV1P50549 477 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 MEP1BQ16820 701 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 C11orf91Q3C1V1 193 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 C9orf135Q5VTT2 229 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 OR13C5Q8NGS8 318 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 NSMAFQ92636 917 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 HDAC2Q92769 488 aaKnown RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 MOAP1Q96BY2 351 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 ISG20L2Q9H9L3 353 aaKnown RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 ABCB9Q9NP78 766 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 ACOT13Q9NPJ3 140 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 USE1Q9NZ43 259 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 MGAT4BQ9UQ53 548 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 A0A1W2PNU3 283 aaPredicted RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 DCDC2BA2VCK2 349 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 UNC119BA6NIH7 251 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 MYL12BO14950 172 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 SLC16A6O15403 523 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 KIAA0513O60268 411 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 CLPXO76031 633 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 NCR1O76036 304 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 TDGF1P13385 188 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 HIST1H1CP16403 213 aaKnown RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 CCKBRP32239 447 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 CTXN1P60606 82 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 SLC35A2P78381 396 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 OR7A5Q15622 319 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 SYT14P1Q58G82 188 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 GARNL3Q5VVW2 1013 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 CPEB2Q7Z5Q1 589 aaKnown RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 KLBQ86Z14 1044 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 APCDD1LQ8NCL9 501 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 OR1N1Q8NGS0 311 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 UBL7Q96S82 380 aaPredicted RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 SPATA9Q9BWV2 254 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 PRMT8Q9NR22 394 aaPredicted RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 SNTG1Q9NSN8 517 aa9.62□□□□□ -0.87
VPS11-208ENST00000621676 AKAP7Q9P0M2 348 aaPredicted RBP9.62□□□□□ -0.87
VPS11-208ENST00000621676 TEX13CA0A0J9YWL9 993 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 TCRBV16S1A1N1A0A5B0 115 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 CD8B2A6NJW9 211 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 CLCA1A8K7I4 914 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ADAP00813 363 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 CD8BP10966 210 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 PRKAR1BP31321 381 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 MANEAQ5SRI9 462 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 HEPHL1Q6MZM0 1159 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 YRDCQ86U90 279 aaKnown RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 SLCO6A1Q86UG4 719 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 SLITRK4Q8IW52 837 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 CHCHD3Q9NX63 227 aaKnown RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 NSG1A0A0A6YYJ2 146 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 RNF13O43567 381 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 CPNE3O75131 537 aaKnown RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 AKR7A3O95154 331 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 CLEC2LP0C7M8 214 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 SERPINB10P48595 397 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 SMSP52788 366 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 NRG3P56975 720 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 FUT7Q11130 342 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 QPRTQ15274 297 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 TP53I3Q53FA7 332 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 DCAF12Q5T6F0 453 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ARL9Q6T311 187 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 NAXDQ8IW45 347 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 IPCEF1Q8WWN9 437 aaPredicted RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 MGLLQ99685 303 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 G6PC3Q9BUM1 346 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ERVMER34-1Q9H9K5 563 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 MKKSQ9NPJ1 570 aaPredicted RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 RALYQ9UKM9 306 aaKnown RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 ERGIC3Q9Y282 383 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 H3BMH7 237 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 AIREO43918 545 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 TBX19O60806 448 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 HPRP00739 348 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 CAPNS1P04632 268 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 MST1P26927 711 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 CALRP27797 417 aaKnown RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 HOXD12P35452 270 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 EPHA4P54764 986 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 SMIM11AP58511 58 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 FXYD6P3P58550 94 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ATP1A4Q13733 1029 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 TRIP6Q15654 476 aaKnown RBP9.61□□□□□ -0.87
VPS11-208ENST00000621676 GFOD2Q3B7J2 385 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 SLC23A3Q6PIS1 610 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 B3GNT6Q6ZMB0 384 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 RTL4Q6ZR62 310 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 OVCH1Q7RTY7 1134 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ADCK1Q86TW2 530 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms