RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 RIPPLY1Q0D2K3 151 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 NHLRC3Q5JS37 347 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 CDK20Q8IZL9 346 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF619Q8N2I2 560 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 KCT2Q8NC54 265 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 ARSGQ96EG1 525 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 DERL3Q96Q80 235 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 CHIAQ9BZP6 476 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 MBNL1Q9NR56 388 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 PIPOXQ9P0Z9 390 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 NPIPA5A0A0B4J1W7 369 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 ABHD14A-ACY1A0A1B0GW23 586 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 hCG_1807616A0A1W2PRN6 198 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 OR52A4PA6NMU1 304 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 NPIPA7E9PJI5 369 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 ATP1B1P05026 303 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 NPIPA8P0DM63 369 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 NAGAP17050 411 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 POU4F2Q12837 409 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 AMZ1Q400G9 498 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 TJAP1Q5JTD0 557 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 METTL11BQ5VVY1 283 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 FAM199XQ6PEV8 388 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 KCTD20Q7Z5Y7 419 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 PIGKQ92643 395 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 CMTM3Q96MX0 182 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 TEX101Q9BY14 249 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 HDAC8Q9BY41 377 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 NRIP3Q9NQ35 241 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 FBXO34Q9NWN3 711 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 HCN3Q9P1Z3 774 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 MED31Q9Y3C7 131 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 PEX12O00623 359 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 ADH1CP00326 375 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 ALDOBP05062 364 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 DBIP07108 87 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 NID1P14543 1247 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 CEBPBP17676 345 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 CXCL2P19875 107 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 ERVFC1P60507 584 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 ELFN2Q5R3F8 820 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 MTSS1LQ765P7 747 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 OR52I2Q8NH67 350 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 LHFPL5Q8TAF8 219 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 SFXN2Q96NB2 322 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 GFI1Q99684 422 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 SEC22CQ9BRL7 303 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 PPA2Q9H2U2 334 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 CCDC86Q9H6F5 360 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 ANKRD10Q9NXR5 420 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 PLEKHM1Q9Y4G2 1056 aa18.06■□□□□ 0.48
PDLIM3-212ENST00000620787 PLSCR5A0PG75 271 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 ANKRD61A6NGH8 418 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 GATBO75879 557 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 LINC00271P0C7V0 271 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 LAMP2P13473 410 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 CTRB1P17538 263 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 NAT1P18440 290 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 KRT33BQ14525 404 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 CTRB2Q6GPI1 263 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF425Q6IV72 752 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 UBE2Q1Q7Z7E8 422 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 OR4N5Q8IXE1 308 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 SLC25A38Q96DW6 304 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 RSPRY1Q96DX4 576 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 ZMYND19Q96E35 227 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 C1QTNF6Q9BXI9 259 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 ZDHHC4Q9NPG8 344 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 CA10Q9NS85 328 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 MGAT4CQ9UBM8 478 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 KCNMB2Q9Y691 235 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 SYNDIG1LA6NDD5 238 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 ARPC1BO15143 372 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 MID1O15344 667 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 ZP3P21754 424 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 MAT2AP31153 395 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 RAD52P43351 418 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 MAP2K6P52564 334 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 GBX2P52951 348 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 SIRPAP78324 504 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 SIM1P81133 766 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 TNFRSF17Q02223 184 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 PLAURQ03405 335 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 SPICQ8N5J4 248 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 RAB7BQ96AH8 199 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 HHIPL1Q96JK4 782 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 USP36Q9P275 1121 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 RABL2AQ9UBK7 228 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 RABL2BQ9UNT1 228 aa18.05■□□□□ 0.48
PDLIM3-212ENST00000620787 NARSO43776 548 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 FMO6PO60774 539 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF888P0CJ79 500 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 ATF4P18848 351 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 FHL1Q13642 323 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 DCST2Q5T1A1 773 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 KIAA1324Q6UXG2 1013 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 C3P1Q6ZMU1 363 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 VN1R4Q7Z5H5 301 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 SYS1Q8N2H4 156 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 DOK4Q8TEW6 326 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms