RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 OR2B2Q9GZK3 357 aa14.55□□□□□ -0.08
CD40-207ENST00000620709 SLC38A1Q9H2H9 487 aa14.55□□□□□ -0.08
CD40-207ENST00000620709 LIME1Q9H400 295 aa14.55□□□□□ -0.08
CD40-207ENST00000620709 C8orf4Q9NR00 106 aa14.55□□□□□ -0.08
CD40-207ENST00000620709 DSPPQ9NZW4 1301 aa14.55□□□□□ -0.08
CD40-207ENST00000620709 AKAP6Q13023 2319 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 DOCK7Q96N67 2140 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 MBD3L4A6NDZ8 208 aaPredicted RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 MBD3L3A6NE82 208 aaPredicted RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 TUBAL3A6NHL2 446 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 MBD3L5A6NJ08 208 aaPredicted RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 hCG_2039718K7EN88 272 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 NKX2-2O95096 273 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 ITGA2P17301 1181 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 POU6F2P78424 691 aaPredicted RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 FOXF2Q12947 444 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 DCST2Q5T1A1 773 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 ZBTB49Q6ZSB9 765 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 LUZP2Q86TE4 346 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 MBD3L2Q8NHZ7 208 aaPredicted RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 LINC01560Q8TB33 94 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 ZPLD1Q8TCW7 415 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 GPR151Q8TDV0 419 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 FAM222BQ8WU58 562 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 INTS12Q96CB8 462 aaKnown RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 DTNBP1Q96EV8 351 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 RMND5BQ96G75 393 aaPredicted RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 CACYBPQ9HB71 228 aaKnown RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 PPP4R1LQ9P1A2 415 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 FOXD3Q9UJU5 478 aaPredicted RBP14.54□□□□□ -0.08
CD40-207ENST00000620709 OAZ3Q9UMX2 235 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 ABCG2Q9UNQ0 655 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 LRRC42Q9Y546 428 aa14.54□□□□□ -0.08
CD40-207ENST00000620709 A6NNC1 897 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 CLCA1A8K7I4 914 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 C17orf51A8MQB3 221 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 FESP07332 822 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 CPN1P15169 458 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 ZNF23P17027 643 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 DPP4P27487 766 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 SRD5A2P31213 254 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 GABRA3P34903 492 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 KCNJ5P48544 419 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 AQP4P55087 323 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 CHRNEQ04844 493 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 DUSP7Q16829 419 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 OR2T5Q6IEZ7 315 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 FRRS1Q6ZNA5 592 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 KIF18BQ86Y91 864 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 EPHX4Q8IUS5 362 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 GCNT2Q8N0V5 402 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 PACRGLQ8N7B6 248 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 OR2T29Q8NH02 315 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 C7orf34Q96L11 122 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 ZNF350Q9GZX5 532 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 COQ10BQ9H8M1 238 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 NTN4Q9HB63 628 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 RASSF1Q9NS23 344 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 CBLCQ9ULV8 474 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 PLEKHA6Q9Y2H5 1048 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 WDR45Q9Y484 360 aa14.53□□□□□ -0.08
CD40-207ENST00000620709 HRNRQ86YZ3 2850 aaPredicted RBP14.53□□□□□ -0.08
CD40-207ENST00000620709 STX11O75558 287 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 HSPA13P48723 471 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 PNLIPRP2P54317 469 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 PSG6Q00889 435 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 TAF11Q15544 211 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 FBXL19-AS1Q494R0 122 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 CHMP1BQ7LBR1 199 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 OLIG3Q7RTU3 272 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 P4HA3Q7Z4N8 544 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 GRAMD2AQ8IUY3 354 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 UBQLNLQ8IYU4 475 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 SVOPLQ8N434 492 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 GPR32P1Q8NGA4 272 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 PIK3R3Q92569 461 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 ZNF347Q96SE7 839 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 SDF2Q99470 211 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 TM9SF2Q99805 663 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 RBM24Q9BX46 236 aaKnown RBP14.52□□□□□ -0.08
CD40-207ENST00000620709 PINK1Q9BXM7 581 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 DSN1Q9H410 356 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 Q9N2J8 555 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 POLE3Q9NRF9 147 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 SH3GLB1Q9Y371 365 aa14.52□□□□□ -0.08
CD40-207ENST00000620709 ITPR3Q14573 2671 aa14.52□□□□□ -0.09
CD40-207ENST00000620709 H0YJX3 145 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 GMFGO60234 142 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 E2F6O75461 281 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 IFNW1P05000 195 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 PABPC4LP0CB38 370 aaKnown RBP14.51□□□□□ -0.09
CD40-207ENST00000620709 ZNF26P17031 533 aaPredicted RBP14.51□□□□□ -0.09
CD40-207ENST00000620709 TNFRSF1BP20333 461 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 DNASE1P24855 282 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 EVI2BP34910 448 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 GFRA1P56159 465 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 RIPPLY3P57055 190 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 PSPHP78330 225 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 IQCCQ4KMZ1 466 aa14.51□□□□□ -0.09
CD40-207ENST00000620709 TYW3Q6IPR3 259 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms