RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CHMP24386 653 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 PTGS2P35354 604 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 KCNC4Q03721 635 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 EGR4Q05215 589 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 CTU2Q2VPK5 515 aaKnown RBP12.28□□□□□ -0.44
NEK3-210ENST00000620675 TMEM176BQ3YBM2 270 aaPredicted RBP12.28□□□□□ -0.44
NEK3-210ENST00000620675 C1orf146Q5VVC0 180 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 NCCRP1Q6ZVX7 275 aaPredicted RBP12.28□□□□□ -0.44
NEK3-210ENST00000620675 NKAIN4Q8IVV8 208 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 TMEM234Q8WY98 164 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 SLCO4A1Q96BD0 722 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 LRGUKQ96M69 825 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 TRIM2Q9C040 744 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 MAN2C1Q9NTJ4 1040 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 ALKBH4Q9NXW9 302 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 ACAD8Q9UKU7 415 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 SLC7A7Q9UM01 511 aa12.28□□□□□ -0.44
NEK3-210ENST00000620675 SPTAN1Q13813 2472 aaKnown RBP12.27□□□□□ -0.44
NEK3-210ENST00000620675 TCRBV3S1A0A5B6 114 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 TPOP07202 933 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 NQO1P15559 274 aaKnown RBP12.27□□□□□ -0.45
NEK3-210ENST00000620675 ZNF708P17019 499 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 GNLYP22749 145 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 ADH6P28332 368 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 EIF1P41567 113 aaKnown RBP12.27□□□□□ -0.45
NEK3-210ENST00000620675 POLR2HP52434 150 aaKnown RBP12.27□□□□□ -0.45
NEK3-210ENST00000620675 GXYLT1Q4G148 440 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 ALG10BQ5I7T1 473 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 GDF7Q7Z4P5 450 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 CD163Q86VB7 1156 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 ZNF845Q96IR2 970 aaPredicted RBP12.27□□□□□ -0.45
NEK3-210ENST00000620675 PRSS27Q9BQR3 290 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 TMEM27Q9HBJ8 222 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 HHATLQ9HCP6 504 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 CHRNA9Q9UGM1 479 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 CAMK2AQ9UQM7 478 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 ENPP4Q9Y6X5 453 aa12.27□□□□□ -0.45
NEK3-210ENST00000620675 TNFSF11O14788 317 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 FMO6PO60774 539 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 SLC19A2O60779 497 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 UQCRBP14927 111 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 TAS2R41P59536 307 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 RAC1P63000 192 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 PPP1R8Q12972 351 aaKnown RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 KPNB1Q14974 876 aaKnown RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 EIF2S3LQ2VIR3 472 aaKnown RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 AAGABQ6PD74 315 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 SLC41A3Q96GZ6 507 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 ADGRG7Q96K78 797 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 ZNF300Q96RE9 604 aaPredicted RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 COQ10BQ9H8M1 238 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 RPS6KB2Q9UBS0 482 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 RIMS3Q9UJD0 308 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 AURKCQ9UQB9 309 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 ZNF835Q9Y2P0 537 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 CACNA1CQ13936 2221 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 NCOA6Q14686 2063 aaPredicted RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 DHRS12A0PJE2 317 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 AQP12BA6NM10 295 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 EIF1AYO14602 144 aaKnown RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 ABOP16442 354 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 APOBEC1P41238 236 aaKnown RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 SELENBP1Q13228 472 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 MTX3Q5HYI7 312 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 ZNF585AQ6P3V2 769 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 ULK3Q6PHR2 472 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 DOLPP1Q86YN1 238 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 ZDHHC21Q8IVQ6 265 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 AQP12AQ8IXF9 295 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 FAM57AQ8TBR7 257 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 TMEM255BQ8WV15 326 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 SLC38A4Q969I6 547 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 TUBA1CQ9BQE3 449 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 DENND2DQ9H6A0 471 aaPredicted RBP12.26□□□□□ -0.45
NEK3-210ENST00000620675 IL1RAPQ9NPH3 570 aa12.26□□□□□ -0.45
NEK3-210ENST00000620675 TRAPPC13A5PLN9 417 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 LRRN3E7EW58 273 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 ACTL6AO96019 429 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 CXCR1P25024 350 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 ELK4P28324 431 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 SYT14P1Q58G82 188 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 RTL6Q6ICC9 239 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 C3orf33Q6P1S2 294 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 ZNF613Q6PF04 617 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 LINC00114Q6XXX2 140 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 MEX3DQ86XN8 651 aaKnown RBP12.25□□□□□ -0.45
NEK3-210ENST00000620675 OR52J3Q8NH60 311 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 SARAFQ96BY9 339 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 KTI12Q96EK9 354 aaPredicted RBP12.25□□□□□ -0.45
NEK3-210ENST00000620675 PRRC1Q96M27 445 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 OR5B2Q96R09 309 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 SRXN1Q9BYN0 137 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 PRDM14Q9GZV8 571 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 VNN3Q9NY84 501 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 OSGIN2Q9Y236 505 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 TESMINQ9Y4I5 508 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 A0A087WUJ7 227 aa12.25□□□□□ -0.45
NEK3-210ENST00000620675 ELOA3DA6NLF2 546 aaPredicted RBP12.25□□□□□ -0.45
NEK3-210ENST00000620675 KPNA4O00629 521 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms