RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TAB1Q15750 504 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 MRPL2Q5T653 305 aaKnown RBP15.21■□□□□ 0.03
HMGN3-203ENST00000620514 ABLIM2Q6H8Q1 611 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 C20orf204Q6ZNR8 217 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 MTDHQ86UE4 582 aaKnown RBP15.21■□□□□ 0.03
HMGN3-203ENST00000620514 VRK2Q86Y07 508 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 MIER2Q8N344 545 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 KISS1RQ969F8 398 aaPredicted RBP15.21■□□□□ 0.03
HMGN3-203ENST00000620514 PIGTQ969N2 578 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 ITCHQ96J02 903 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 HDHD5Q9BXW7 423 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 TPT1P8Q9HAU6 139 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 SLCO1B3Q9NPD5 702 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 OSGIN1Q9UJX0 560 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 TMED7Q9Y3B3 224 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 ZFHX3Q15911 3703 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 TMEM72A0PK05 275 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 RAMP1O60894 148 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 PMS2P2O95744 297 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 BCHEP06276 602 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 DBIP07108 87 aaKnown RBP15.2■□□□□ 0.02
HMGN3-203ENST00000620514 TACR3P29371 465 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 NR1H2P55055 460 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 DSTNP60981 165 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 EPS8Q12929 822 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 ITGADQ13349 1161 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 P2RY6Q15077 328 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 TTMPQ5BVD1 217 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 RPS26P11Q5JNZ5 115 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-203ENST00000620514 Q6ZT83 130 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 MSANTD1Q6ZTZ1 278 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 BHLHA15Q7RTS1 189 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-203ENST00000620514 ATG4DQ86TL0 474 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-203ENST00000620514 CCDC103Q8IW40 242 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 C7orf26Q96N11 449 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 TMEM204Q9BSN7 226 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 RMND5AQ9H871 391 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 RLIMQ9NVW2 624 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 P2RX2Q9UBL9 471 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 HDGFL3Q9Y3E1 203 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 DSCAMO60469 2012 aa15.2■□□□□ 0.02
HMGN3-203ENST00000620514 DSPPQ9NZW4 1301 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 IGKV3D-15A0A087WSY6 115 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 FAM234BA2RU67 622 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF716A6NP11 495 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 LYZL6O75951 148 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 TFPTP0C1Z6 253 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 GKN3PP0CG01 181 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 POLR2HP52434 150 aaKnown RBP15.19■□□□□ 0.02
HMGN3-203ENST00000620514 OR2B6P58173 313 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 GNA13Q14344 377 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 Q5PR19 223 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 C6orf10Q5SRN2 563 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 SHEQ5VZ18 495 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 SLC2A7Q6PXP3 512 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 SEZ6L2Q6UXD5 910 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF836Q6ZNA1 936 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 GALNT5Q7Z7M9 940 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 P3H2Q8IVL5 708 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 PEX5LQ8IYB4 626 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 LRRC75A-AS1Q8N1F1 130 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 OR52P1PQ8NH57 321 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 LRRC8CQ8TDW0 803 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 SLC38A5Q8WUX1 472 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 IGFBPL1Q8WX77 278 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 GTF2H4Q92759 462 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 ZHX1-C8orf76Q96EF9 292 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 PERPQ96FX8 193 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 ATP6V1G3Q96LB4 118 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 SMR3AQ99954 134 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 EBF4Q9BQW3 602 aa15.19■□□□□ 0.02
HMGN3-203ENST00000620514 PAIP1Q9H074 479 aaKnown RBP15.19■□□□□ 0.02
HMGN3-203ENST00000620514 ARID1AO14497 2285 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 ZC3H12DA2A288 527 aaKnown RBP15.18■□□□□ 0.02
HMGN3-203ENST00000620514 CFAP73A6NFT4 308 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 FAAHO00519 579 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 IGHV3-9P01782 118 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 NUDT7P0C024 238 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 IMPDH2P12268 514 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 FOSL1P15407 271 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 IGHV1-2P23083 117 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 NTF4P34130 210 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 SLC1A3P43003 542 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 MAGEA8P43361 318 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 HTR3AP46098 478 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 CLK1P49759 484 aaKnown RBP15.18■□□□□ 0.02
HMGN3-203ENST00000620514 IDH3AP50213 366 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 CAPRIN1Q14444 709 aaKnown RBP15.18■□□□□ 0.02
HMGN3-203ENST00000620514 PDK3Q15120 406 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF100Q8IYN0 542 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 CLIP4Q8N3C7 705 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 HSD17B8Q92506 261 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 PMM1Q92871 262 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 TMEM19Q96HH6 336 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 TCF7L2Q9NQB0 619 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 TMEM181Q9P2C4 612 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 PCDHB14Q9Y5E9 798 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 NF1P21359 2839 aa15.18■□□□□ 0.02
HMGN3-203ENST00000620514 CDHR4A6H8M9 788 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 HS3ST1O14792 307 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms