RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CCDC106Q9BWC9 280 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 QRSL1Q9H0R6 528 aaKnown RBP10.54□□□□□ -0.72
UPF3B-204ENST00000619445 ASB6Q9NWX5 421 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 CISD1Q9NZ45 108 aaKnown RBP10.54□□□□□ -0.72
UPF3B-204ENST00000619445 MARCOQ9UEW3 520 aaPredicted RBP10.54□□□□□ -0.72
UPF3B-204ENST00000619445 BTNL2Q9UIR0 455 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 KCNE5Q9UJ90 142 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
UPF3B-204ENST00000619445 CHD3Q12873 2000 aaKnown RBP10.54□□□□□ -0.72
UPF3B-204ENST00000619445 CIB4A0PJX0 185 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 FAAHO00519 579 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF208O43345 1280 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 MRPL33O75394 65 aaKnown RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 CPSF4O95639 269 aaKnown RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 BMP4P12644 408 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 PAX7P23759 505 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 RNF144AP50876 292 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 SLC35A1P78382 337 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 DMTNQ08495 405 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 TNK1Q13470 666 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 TSC22D1Q15714 1073 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 GPAT3Q53EU6 434 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 TNFAIP8L2Q6P589 184 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 FRRS1Q6ZNA5 592 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF440Q8IYI8 595 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 UBE2J2Q8N2K1 259 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF433Q8N7K0 673 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 GLB1L3Q8NCI6 653 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 LILRB1Q8NHL6 650 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF75CPQ92670 426 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 DDIT4LQ96D03 193 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 PKNOX2Q96KN3 472 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 ADAD1Q96M93 576 aaKnown RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 ZBTB18Q99592 522 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 SLC35A5Q9BS91 424 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 NAA11Q9BSU3 229 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 MTHFD2LQ9H903 347 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 MEAF6Q9HAF1 191 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 TAS2R16Q9NYV7 291 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 TMEM181Q9P2C4 612 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 MALT1Q9UDY8 824 aa10.53□□□□□ -0.72
UPF3B-204ENST00000619445 MAGED1Q9Y5V3 778 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-204ENST00000619445 WDR91A4D1P6 747 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 DPRXA6NFQ7 191 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 CCT8L1PA6NM43 557 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 ITM2AO43736 263 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 TLX2O43763 284 aaPredicted RBP10.52□□□□□ -0.72
UPF3B-204ENST00000619445 KRT75O95678 551 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 SOD3P08294 240 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 DHRS4L1P0CG22 281 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 CREB1P16220 341 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 IGHV1-2P23083 117 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 RYKP34925 604 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.72
UPF3B-204ENST00000619445 CDH11P55287 796 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 DSCR9P59020 149 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 STX3Q13277 289 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 MAPK14Q16539 360 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 GSTA3Q16772 222 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 FAM174BQ3ZCQ3 159 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 SPANXN4Q5MJ08 99 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 SEZ6L2Q6UXD5 910 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 LRRC74BQ6ZQY2 392 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 SPATA19Q7Z5L4 167 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 ANKRD46Q86W74 232 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 C17orf78Q8N4C9 275 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 C1orf162Q8NEQ5 155 aaPredicted RBP10.52□□□□□ -0.72
UPF3B-204ENST00000619445 KBTBD8Q8NFY9 601 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 PANX1Q96RD7 426 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF300Q96RE9 604 aaPredicted RBP10.52□□□□□ -0.72
UPF3B-204ENST00000619445 TRAF4Q9BUZ4 470 aaPredicted RBP10.52□□□□□ -0.72
UPF3B-204ENST00000619445 REG4Q9BYZ8 158 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 SLCO5A1Q9H2Y9 848 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 PIF1Q9H611 641 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 CTPS2Q9NRF8 586 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 CALML5Q9NZT1 146 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 PRSS50Q9UI38 385 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 SLC9A8Q9Y2E8 581 aa10.52□□□□□ -0.72
UPF3B-204ENST00000619445 RTTNQ86VV8 2226 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 FAM234BA2RU67 622 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 CCDC154A6NI56 674 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 AGAP5A6NIR3 686 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 TRPC5OSA6NMA1 111 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 ZNF716A6NP11 495 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 INAFM1C9JVW0 142 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 SLCO1B7G3V0H7 640 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 ABCD4O14678 606 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 DBIP07108 87 aaKnown RBP10.52□□□□□ -0.73
UPF3B-204ENST00000619445 THBS1P07996 1170 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 IL7RP16871 459 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 SLC1A3P43003 542 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 PGGHGQ32M88 737 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 ABHD12BQ7Z5M8 362 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-204ENST00000619445 RAB8BQ92930 207 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 PPP1R36Q96LQ0 422 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 RHNO1Q9BSD3 238 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 NUF2Q9BZD4 464 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 ARMC7Q9H6L4 198 aa10.52□□□□□ -0.73
UPF3B-204ENST00000619445 CACYBPQ9HB71 228 aaKnown RBP10.52□□□□□ -0.73
UPF3B-204ENST00000619445 THUMPD1Q9NXG2 353 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms