RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZNF382Q96SR6 550 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 NPAS1Q99742 590 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 NAA11Q9BSU3 229 aaPredicted RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 MRPL1Q9BYD6 325 aaKnown RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 MS4A5Q9H3V2 200 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 PPANQ9NQ55 473 aaKnown RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 CHMP2BQ9UQN3 213 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 VDAC3Q9Y277 283 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 JRKLQ9Y4A0 524 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 DTNAQ9Y4J8 743 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 SVEP1Q4LDE5 3571 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 CIB4A0PJX0 185 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 SHISA8B8ZZ34 492 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 F5H0A9 414 aaPredicted RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 TP73O15350 636 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ULK1O75385 1050 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 NGFP01138 241 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ADH4P08319 380 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 RBP1P09455 135 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ZNF12P17014 697 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ARR3P36575 388 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ATP4BP51164 291 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 GUCY2DQ02846 1103 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 COL10A1Q03692 680 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 HGFACQ04756 655 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 HLXQ14774 488 aaPredicted RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 RASA2Q15283 850 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 CPSF6Q16630 551 aaKnown RBP eCLIP3.94□□□□□ -1.78
SNCA-213ENST00000618500 COX20Q5RI15 118 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 SAMD5Q5TGI4 173 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 OLFML2AQ68BL7 652 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 KLHL24Q6TFL4 600 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 C1orf52Q8N6N3 182 aaKnown RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 OR52N5Q8NH56 324 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ARL5BQ96KC2 179 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 C1orf147Q96MC9 270 aaPredicted RBP3.94□□□□□ -1.78
SNCA-213ENST00000618500 PKP2Q99959 881 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 KCNS3Q9BQ31 491 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 PIGUQ9H490 435 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 GLIPR2Q9H4G4 154 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 ELOVL6Q9H5J4 265 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 C16orf95Q9H693 158 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 BEX1Q9HBH7 125 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 IL20RAQ9UHF4 553 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 PCDHGB4Q9UN71 923 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 RCE1Q9Y256 329 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 FLVCR1Q9Y5Y0 555 aa3.94□□□□□ -1.78
SNCA-213ENST00000618500 BIRC6Q9NR09 4857 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 GXYLT2A0PJZ3 443 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SLC22A23A1A5C7 686 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 MANBAO00462 879 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 PIP5K1BO14986 540 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 RSL1D1O76021 490 aaKnown RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 KRT6AP02538 564 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 KRT6BP04259 564 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 ALOX5P09917 674 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 STX2P32856 288 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 MTNR1AP48039 350 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 KRT6CP48668 564 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 DIO1P49895 249 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 NCBP2P52298 156 aaKnown RBP eCLIP3.93□□□□□ -1.78
SNCA-213ENST00000618500 PGGT1BP53609 377 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 PKNOX1P55347 436 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SLC35A1P78382 337 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TXNL4AP83876 142 aaKnown RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 STX5Q13190 355 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SKP2Q13309 424 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TRIP10Q15642 601 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CD226Q15762 336 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 ADRM1Q16186 407 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TMEM176BQ3YBM2 270 aaPredicted RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 ASPHD2Q6ICH7 369 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CDC73Q6P1J9 531 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 MMGT1Q8N4V1 131 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 FBXO36Q8NEA4 188 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CKAP2Q8WWK9 683 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 PMM1Q92871 262 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SLC25A28Q96A46 364 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 ESAMQ96AP7 390 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 FBXO17Q96EF6 278 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 NOL11Q9H8H0 719 aaKnown RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 NOX4Q9NPH5 578 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 DDX18Q9NVP1 670 aaKnown RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 SLC12A4Q9UP95 1085 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TRAF6Q9Y4K3 522 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 GPR45Q9Y5Y3 372 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 POMT1Q9Y6A1 747 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 DNAH1Q9P2D7 4330 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TENM1Q9UKZ4 2725 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 NPIPA5A0A0B4J1W7 369 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 NPIPA7E9PJI5 369 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 MRPL33O75394 65 aaKnown RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 SKAP2O75563 359 aaPredicted RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 LY6HO94772 140 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SEC31AO94979 1220 aaKnown RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 PLATP00750 562 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 NPIPA8P0DM63 369 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 EDNRAP25101 427 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CALCRP30988 508 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 GABRA3P34903 492 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms