RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 MED31Q9Y3C7 131 aa16.05■□□□□ 0.16
CNOT3-209ENST00000617930 CDC14CA4D256 554 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 LRRN3E7EW58 273 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 KHNYNO15037 678 aaKnown RBP16.04■□□□□ 0.16
CNOT3-209ENST00000617930 CSTAP01040 98 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 PPICP45877 212 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 DAB2P98082 770 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 RAB40BQ12829 278 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 NSDHLQ15738 373 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 FCRLBQ6BAA4 426 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 GDPGP1Q6ZNW5 385 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 LANCL3Q6ZV70 420 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 GDPD3Q7L5L3 318 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 SLITRK4Q8IW52 837 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 ZNF485Q8NCK3 441 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 FAM71CQ8NEG0 241 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 OR4D9Q8NGE8 314 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 LOXL4Q96JB6 756 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 TNFRSF13CQ96RJ3 184 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 TRIM2Q9C040 744 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 NTN3O00634 580 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-209ENST00000617930 DYRK3O43781 588 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 ENDOUP21128 410 aaKnown RBP16.04■□□□□ 0.16
CNOT3-209ENST00000617930 TNFSF8P32971 234 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 RPS19P39019 145 aaKnown RBP16.04■□□□□ 0.16
CNOT3-209ENST00000617930 CRYBB2P43320 205 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 RORCP51449 518 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 CDH11P55287 796 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 RUNX1T1Q06455 604 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 BIKQ13323 160 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 C3orf38Q5JPI3 329 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 ARHGAP40Q5TG30 622 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 SMARCD3Q6STE5 483 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 LNX2Q8N448 690 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 LRRC17Q8N6Y2 441 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 NAT6Q93015 286 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 PTP4A1Q93096 173 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 SLC46A1Q96NT5 459 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 MCCC2Q9HCC0 563 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 APMAPQ9HDC9 416 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 MKL2Q9ULH7 1088 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 SSR3Q9UNL2 185 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 PCDHGA5Q9Y5G8 931 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 CLCA3PQ9Y6N3 262 aa16.04■□□□□ 0.16
CNOT3-209ENST00000617930 KIF26BQ2KJY2 2108 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 IL33O95760 270 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 ANKRD34CP0C6C1 535 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 MST1P26927 711 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 ELAVL1Q15717 326 aaKnown RBP16.03■□□□□ 0.16
CNOT3-209ENST00000617930 PLBD1Q6P4A8 553 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 CELF2-AS1Q8N7Q2 184 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 TMCO6Q96DC7 493 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 SDHCQ99643 169 aaPredicted RBP16.03■□□□□ 0.16
CNOT3-209ENST00000617930 SNTG1Q9NSN8 517 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 MED17Q9NVC6 651 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 NDUFB11Q9NX14 153 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 POU2F3Q9UKI9 436 aa16.03■□□□□ 0.16
CNOT3-209ENST00000617930 RBMX2Q9Y388 322 aaKnown RBP16.03■□□□□ 0.16
CNOT3-209ENST00000617930 ZNF670-ZNF695F2Z2N8 137 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 LALBAP00709 142 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 SAGP10523 405 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-209ENST00000617930 FOXK2Q01167 660 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 MLLT11Q13015 90 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-209ENST00000617930 EBPQ15125 230 aaKnown RBP16.02■□□□□ 0.16
CNOT3-209ENST00000617930 KLHL22Q53GT1 634 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 NXNL2Q5VZ03 156 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 ULK3Q6PHR2 472 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 SPATC1Q76KD6 591 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 ZNF550Q7Z398 422 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 PHC2Q8IXK0 858 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 SUMF1Q8NBK3 374 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 SLC35B4Q969S0 331 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 LCORQ96JN0 433 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-209ENST00000617930 OCIAD1Q9NX40 245 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 TRAPPC4Q9Y296 219 aa16.02■□□□□ 0.16
CNOT3-209ENST00000617930 IGHV3-20A0A0C4DH32 117 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 J3QRE1 110 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 TOX3O15405 576 aaPredicted RBP16.02■□□□□ 0.15
CNOT3-209ENST00000617930 WISP1O95388 367 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 UTS2O95399 124 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 GSTT2P0CG29 244 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 GSTT2BP0CG30 244 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 RORAP35398 523 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 CRYZQ08257 329 aaKnown RBP16.02■□□□□ 0.15
CNOT3-209ENST00000617930 LIPKQ5VXJ0 399 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 FAAH2Q6GMR7 532 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 LHFPL3Q86UP9 236 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 CMIPQ8IY22 773 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 SIRT6Q8N6T7 355 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 GATAD2BQ8WXI9 593 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 KISS1RQ969F8 398 aaPredicted RBP16.02■□□□□ 0.15
CNOT3-209ENST00000617930 C3orf49Q96BT1 292 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 ADOQ96SZ5 270 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 TIMP4Q99727 224 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 EVA1AQ9H8M9 152 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 KRCC1Q9NPI7 259 aaPredicted RBP16.02■□□□□ 0.15
CNOT3-209ENST00000617930 FBXL4Q9UKA2 621 aa16.02■□□□□ 0.15
CNOT3-209ENST00000617930 EXOGQ9Y2C4 368 aaKnown RBP16.02■□□□□ 0.15
CNOT3-209ENST00000617930 OTOGLQ3ZCN5 2332 aa16.01■□□□□ 0.15
CNOT3-209ENST00000617930 IGKV1D-42A0A075B6H8 117 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms