RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ELK4P28324 431 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 GIPRP48546 466 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 SNRPGP62308 76 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 GINS1Q14691 196 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 CD226Q15762 336 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 TIPARPQ7Z3E1 657 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 RPS19BP1Q86WX3 136 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 GPALPP1Q8IXQ4 340 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 ZNF540Q8NDQ6 660 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 OR2T33Q8NG76 320 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 RHOXF1Q8NHV9 184 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 FANK1Q8TC84 345 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 SPACA9Q96E40 222 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 RASL10BQ96S79 203 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 PTGES2Q9H7Z7 377 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 PLCXD1Q9NUJ7 323 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 FLRT3Q9NZU0 649 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 CNIH4Q9P003 139 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 PPP4R1LQ9P1A2 415 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 RNF6Q9Y252 685 aa15.32■□□□□ 0.04
TRAPPC3-210ENST00000617904 TENM4Q6N022 2769 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 PIEZO2Q9H5I5 2752 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 EFCAB10A6NFE3 127 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 SOCS6O14544 535 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 PRKNO60260 465 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ITGA10O75578 1167 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 SMNDC1O75940 238 aaKnown RBP eCLIP15.31■□□□□ 0.043e-7■□□□□ 8.5
TRAPPC3-210ENST00000617904 HIST1H2ABP04908 130 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ITGB2P05107 769 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 SERPINA7P05543 415 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 GPR4P46093 362 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 POLR2HP52434 150 aaKnown RBP15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 MAP2K6P52564 334 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 FOXL2P58012 376 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ZNF117Q03924 483 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 CRYZQ08257 329 aaKnown RBP15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 NFATC3Q12968 1075 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 SNAPC1Q16533 368 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 NTRK2Q16620 822 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 C12orf73Q69YU5 71 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 SLC30A6Q6NXT4 461 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 HIST3H2AQ7L7L0 130 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 OAFQ86UD1 273 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ENTHD1Q8IYW4 607 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ST8SIA1Q92185 356 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 HIST1H2ACQ93077 130 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 RFKQ969G6 155 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 C3orf49Q96BT1 292 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ARSGQ96EG1 525 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 SH3YL1Q96HL8 342 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 FER1L6-AS2Q96M78 137 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 NODALQ96S42 347 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 TSSK6Q9BXA6 273 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 POLDIP3Q9BY77 421 aaKnown RBP15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 TAS2R10Q9NYW0 307 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 IL20Q9NYY1 176 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 H2AFY2Q9P0M6 372 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ICAM5Q9UMF0 924 aa15.31■□□□□ 0.04
TRAPPC3-210ENST00000617904 ANKUB1A6NFN9 424 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 E9PQ18 207 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 KPNA4O00629 521 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 NOL3O60936 208 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 BCAS1O75363 584 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 NADKO95544 446 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 SLC6A6P31641 620 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 CASRP41180 1078 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 PCYT1AP49585 367 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 ZNF41P51814 821 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 FBXW4P57775 412 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 CDK5Q00535 292 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 MVKQ03426 396 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 APOFQ13790 326 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 TMEM81Q6P7N7 255 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 SMARCD3Q6STE5 483 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 LINC00114Q6XXX2 140 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 ZNF620Q6ZNG0 422 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 RTL4Q6ZR62 310 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 GRINAQ7Z429 371 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 PPP1R32Q7Z5V6 425 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 C10orf53Q8N6V4 93 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 OR5M3Q8NGP4 307 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 CNIH3Q8TBE1 160 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 BRIX1Q8TDN6 353 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 DUSP19Q8WTR2 217 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 HGDQ93099 445 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 ZNF426Q9BUY5 554 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 CCDC90BQ9GZT6 254 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 GPN2Q9H9Y4 310 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 LIN28AQ9H9Z2 209 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 HPF1Q9NWY4 346 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 P4HTMQ9NXG6 502 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 TVP23BQ9NYZ1 205 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 FBXL4Q9UKA2 621 aa15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 RPL36Q9Y3U8 105 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 SPIN1Q9Y657 262 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-210ENST00000617904 SDK2Q58EX2 2172 aa15.29■□□□□ 0.04
TRAPPC3-210ENST00000617904 TRIM64A6NGJ6 449 aa15.29■□□□□ 0.04
TRAPPC3-210ENST00000617904 PTGES3LE9PB15 166 aa15.29■□□□□ 0.04
TRAPPC3-210ENST00000617904 CDK2AP1O14519 115 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms