RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 ZNF440Q8IYI8 595 aa22.38■■□□□ 1.17
VEGFA-228ENST00000617771 DYDC1Q8WWB3 177 aa22.38■■□□□ 1.17
VEGFA-228ENST00000617771 KISS1RQ969F8 398 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF300Q96RE9 604 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-228ENST00000617771 CCL19Q99731 98 aa22.38■■□□□ 1.17
VEGFA-228ENST00000617771 USB1Q9BQ65 265 aaKnown RBP22.38■■□□□ 1.17
VEGFA-228ENST00000617771 EMC3Q9P0I2 261 aa22.38■■□□□ 1.17
VEGFA-228ENST00000617771 CFAP73A6NFT4 308 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 BCHEP06276 602 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 MRPL19P49406 292 aaKnown RBP22.37■■□□□ 1.17
VEGFA-228ENST00000617771 ITGADQ13349 1161 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 PDK3Q15120 406 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 GTDC1Q4AE62 458 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 LIN52Q52LA3 116 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 ABLIM2Q6H8Q1 611 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 Q6ZT83 130 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 GALNT5Q7Z7M9 940 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 GOLGA6L1Q8N7Z2 621 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 DDIT4LQ96D03 193 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 PLPPR2Q96GM1 343 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 CACYBPQ9HB71 228 aaKnown RBP22.37■■□□□ 1.17
VEGFA-228ENST00000617771 SLCO1B3Q9NPD5 702 aa22.37■■□□□ 1.17
VEGFA-228ENST00000617771 TMED7-TICAM2A0A0A6YYA0 188 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF814B7Z6K7 855 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 SMPD2O60906 423 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 CCNA2P20248 432 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 HOXC12P31275 282 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 SLC1A3P43003 542 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 MAP2K6P52564 334 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 NKX6-1P78426 367 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-228ENST00000617771 EPS8Q12929 822 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 MAPK11Q15759 364 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 TTMPQ5BVD1 217 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 SHEQ5VZ18 495 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF704Q6ZNC4 412 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-228ENST00000617771 OR52P1PQ8NH57 321 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 PIGXQ8TBF5 258 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 SLC38A5Q8WUX1 472 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 HSD17B8Q92506 261 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 GTF2H4Q92759 462 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF775Q96BV0 537 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-228ENST00000617771 AURKBQ96GD4 344 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-228ENST00000617771 ARL5BQ96KC2 179 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 OR11A1Q9GZK7 315 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 RAD21L1Q9H4I0 556 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 NGBQ9NPG2 151 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 OSGIN1Q9UJX0 560 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 PRDM4Q9UKN5 801 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 TMED7Q9Y3B3 224 aa22.36■■□□□ 1.17
VEGFA-228ENST00000617771 DSPPQ9NZW4 1301 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF469Q96JG9 3925 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-228ENST00000617771 IGKV3D-15A0A087WSY6 115 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 ARHGEF9O43307 516 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF208O43345 1280 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 TFPTP0C1Z6 253 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 TACR3P29371 465 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 OR2B6P58173 313 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 TSC22D1Q15714 1073 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 ZSWIM7Q19AV6 140 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 ALKBH2Q6NS38 261 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF100Q8IYN0 542 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 LRRC75A-AS1Q8N1F1 130 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 WFDC11Q8NEX6 87 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 CCDC28BQ9BUN5 200 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 TMEM181Q9P2C4 612 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 PRSS50Q9UI38 385 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 TRAPPC4Q9Y296 219 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 PCDHB14Q9Y5E9 798 aa22.35■■□□□ 1.17
VEGFA-228ENST00000617771 CDHR4A6H8M9 788 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 CNOT4O95628 575 aaKnown RBP22.34■■□□□ 1.17
VEGFA-228ENST00000617771 FOSL1P15407 271 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 IDH3AP50213 366 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 LARS2Q15031 903 aaKnown RBP22.34■■□□□ 1.17
VEGFA-228ENST00000617771 SLC2A7Q6PXP3 512 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 BHLHA15Q7RTS1 189 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-228ENST00000617771 VRK2Q86Y07 508 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 P3H2Q8IVL5 708 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 DNAJA3Q96EY1 480 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 TMEM19Q96HH6 336 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 POTEKPQ9BYX7 375 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 PAIP1Q9H074 479 aaKnown RBP22.34■■□□□ 1.17
VEGFA-228ENST00000617771 ARMC7Q9H6L4 198 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 RLIMQ9NVW2 624 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF232Q9UNY5 417 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF443Q9Y2A4 671 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-228ENST00000617771 ITPR3Q14573 2671 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 VPS13CQ709C8 3753 aa22.34■■□□□ 1.17
VEGFA-228ENST00000617771 A0A0G2JPF8 293 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 TMEM72A0PK05 275 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 HNRNPCL2B2RXH8 293 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 HNRNPCL3B7ZW38 293 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 GPR171O14626 319 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 HNRNPCL1O60812 293 aaKnown RBP22.33■■□□□ 1.17
VEGFA-228ENST00000617771 THBS1P07996 1170 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 HNRNPCL4P0DMR1 293 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 FADDQ13158 208 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 RNF220Q5VTB9 566 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 ZNF836Q6ZNA1 936 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 HDXQ7Z353 690 aa22.33■■□□□ 1.17
VEGFA-228ENST00000617771 EBF4Q9BQW3 602 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms