RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 HMGA1P17096 107 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 PRMT2P55345 433 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 TAS2R38P59533 333 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 CTAG1AP78358 180 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 CBFBQ13951 182 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 GPNMBQ14956 572 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 PAN3Q58A45 887 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 NIPAL3Q6P499 406 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 GLDNQ6ZMI3 551 aaPredicted RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 HIST3H2AQ7L7L0 130 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SSX6Q7RTT6 188 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 NUP43Q8NFH3 380 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 OR9A2Q8NGT5 310 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 PAQR8Q8TEZ7 354 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 HIST1H2ACQ93077 130 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 TIFAQ96CG3 184 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SCLYQ96I15 445 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ZNF75AQ96N20 296 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 AMDHD1Q96NU7 426 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 C7orf50Q9BRJ6 194 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 CWH43Q9H720 699 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ADAP2Q9NPF8 381 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 BIN3Q9NQY0 253 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 C14orf105Q9NVL8 296 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ABRACLQ9P1F3 81 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 FARSAQ9Y285 508 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 CA5BQ9Y2D0 317 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 WDR45Q9Y484 360 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 CHD5Q8TDI0 1954 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 PTPRDP23468 1912 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 RAB19A4D1S5 217 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 OR2W5A6NFC9 320 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SLC22A31A6NKX4 558 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 LATO43561 262 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 RAD1O60671 282 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 EPPINO95925 133 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 EOMESO95936 686 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 FGF2P09038 288 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SBK2P0C263 348 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SYN1P17600 705 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ITPKBP27987 946 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 HLA-FP30511 346 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 FAUP35544 74 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 PRR5P85299 388 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 DYRK1AQ13627 763 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SERTAD2Q14140 314 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SMCO1Q147U7 214 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 GXYLT1Q4G148 440 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 HACD4Q5VWC8 232 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ZNF660Q6AZW8 331 aaPredicted RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 OR7E24Q6IFN5 339 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 RNF44Q7L0R7 432 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 RAB11FIP2Q7L804 512 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 CCDC36Q8IYA8 594 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 C10orf53Q8N6V4 93 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ZNF485Q8NCK3 441 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 OR5M9Q8NGP3 310 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SLC22A8Q8TCC7 542 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 CASTOR1Q8WTX7 329 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 TFGQ92734 400 aaPredicted RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 DNAJA3Q96EY1 480 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SARGQ9BW04 601 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SLITRK2Q9H156 845 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 MRPS18AQ9NVS2 196 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 SIDT1Q9NXL6 827 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 IKZF2Q9UKS7 526 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 NOP16Q9Y3C1 178 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 NPFFR2Q9Y5X5 522 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ASCC3Q8N3C0 2202 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 RALGAPA2Q2PPJ7 1873 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 IGLV3-16A0A075B6K0 115 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 TRAV18A0A075B6X5 111 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SERTM1A2A2V5 107 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 LINC00587B1AMM8 73 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 K7ESM1 405 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 KCNAB3O43448 404 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 NDUFA2O43678 99 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 FADS1O60427 444 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 TGM6O95932 706 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 GALTP07902 379 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 CDK2P24941 298 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 MPIP34949 423 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 AKR1C3P42330 323 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 CENPAP49450 140 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 MEOX2P50222 304 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ARFIP1P53367 373 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 EPHB3P54753 998 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 PSMD4P55036 377 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 H2BFSP57053 126 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 GUCA2AQ02747 115 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 ELAVL2Q12926 359 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 RBM39Q14498 530 aaKnown RBP6.18□□□□□ -1.42
LMO3-235ENST00000616247 KCNAB1Q14722 419 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SLC9A5Q14940 896 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 MAPK14Q16539 360 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 GUCA2BQ16661 112 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 PRRT3Q5FWE3 981 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 SLC25A30Q5SVS4 291 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 THSD4Q6ZMP0 1018 aa6.18□□□□□ -1.42
LMO3-235ENST00000616247 METTL3Q86U44 580 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms