RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 FUNDC1Q8IVP5 155 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 OR5W2Q8NH69 310 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 MRGPRX4Q96LA9 322 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 OR52E6Q96RD3 313 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 PANX1Q96RD7 426 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 ZBTB18Q99592 522 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 CCDC106Q9BWC9 280 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 LAT2Q9GZY6 243 aa16.84■□□□□ 0.29
CDX1-202ENST00000616154 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.84■□□□□ 0.29
CDX1-202ENST00000616154 C9JVG2 144 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 INAFM1C9JVW0 142 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 HMGN4O00479 90 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 SLC22A3O75751 556 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 NUDT14O95848 222 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 ZCCHC18P0CG32 403 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 PRKCAP17252 672 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 CDKN2CP42773 168 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 STX1BP61266 288 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 RPS4XP62701 263 aaKnown RBP16.83■□□□□ 0.28
CDX1-202ENST00000616154 KLF10Q13118 480 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 CAPRIN1Q14444 709 aaKnown RBP16.83■□□□□ 0.28
CDX1-202ENST00000616154 SFRP5Q5T4F7 317 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 TNFAIP8L2Q6P589 184 aaPredicted RBP16.83■□□□□ 0.28
CDX1-202ENST00000616154 FCRLAQ7L513 359 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 C16orf62Q7Z3J2 963 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 TUSC5Q8IXB3 177 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 ZNF524Q96C55 264 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 ROPN1LQ96C74 230 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 LRRC37BQ96QE4 947 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 INPP5KQ9BT40 448 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 COQ10BQ9H8M1 238 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 SLC52A3Q9NQ40 469 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 MKLN1Q9UL63 735 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 WDR45Q9Y484 360 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 RNF115Q9Y4L5 304 aa16.83■□□□□ 0.28
CDX1-202ENST00000616154 SONP18583 2426 aaKnown RBP16.83■□□□□ 0.28
CDX1-202ENST00000616154 KIAA1324LA8MWY0 1029 aaPredicted RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 GTPBP1O00178 669 aaKnown RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 PRKD3O94806 890 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 C1QCP02747 245 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 IL32P24001 234 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 CHI3L1P36222 383 aaPredicted RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 RNF144AP50876 292 aaPredicted RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 MVDP53602 400 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 GPR68Q15743 365 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 TOMM34Q15785 309 aaPredicted RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 MAPK14Q16539 360 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 NDUFAF6Q330K2 333 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 TMEM176BQ3YBM2 270 aaPredicted RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 NCMAPQ5T1S8 102 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 ZNF619Q8N2I2 560 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 FITM2Q8N6M3 262 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 OR9I1Q8NGQ6 314 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 LILRB1Q8NHL6 650 aaPredicted RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 ZFP90Q8TF47 636 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 TSPEARQ8WU66 669 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 XAGE5Q8WWM1 108 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 PMM1Q92871 262 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 RAB8BQ92930 207 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 TRNT1Q96Q11 434 aaKnown RBP16.82■□□□□ 0.28
CDX1-202ENST00000616154 NGBQ9NPG2 151 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 LAMP3Q9UQV4 416 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 LIPT1Q9Y234 373 aa16.82■□□□□ 0.28
CDX1-202ENST00000616154 CHD3Q12873 2000 aaKnown RBP16.81■□□□□ 0.28
CDX1-202ENST00000616154 ATRQ13535 2644 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 FAM234BA2RU67 622 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 CD3EP07766 207 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 YES1P07947 543 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 PGM1P36871 562 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 ANXA11P50995 505 aaKnown RBP16.81■□□□□ 0.28
CDX1-202ENST00000616154 CASP9P55211 416 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 PLAURQ03405 335 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 SELENBP1Q13228 472 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 CBFBQ13951 182 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 P2RY6Q15077 328 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 TSC22D1Q15714 1073 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 TAB1Q15750 504 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 ALKBH2Q6NS38 261 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 BLOC1S3Q6QNY0 202 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 C6orf89Q6UWU4 347 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 EIF3MQ7L2H7 374 aaKnown RBP16.81■□□□□ 0.28
CDX1-202ENST00000616154 RNF130Q86XS8 419 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 TREML1Q86YW5 311 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 SLC43A2Q8N370 569 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 ST8SIA1Q92185 356 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 HSD17B8Q92506 261 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 USB1Q9BQ65 265 aaKnown RBP16.81■□□□□ 0.28
CDX1-202ENST00000616154 POTEKPQ9BYX7 375 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 ESRP2Q9H6T0 727 aaKnown RBP16.81■□□□□ 0.28
CDX1-202ENST00000616154 EXOSC3Q9NQT5 275 aaKnown RBP16.81■□□□□ 0.28
CDX1-202ENST00000616154 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 SLC35A3Q9Y2D2 325 aa16.81■□□□□ 0.28
CDX1-202ENST00000616154 ANK3Q12955 4377 aaKnown RBP16.8■□□□□ 0.28
CDX1-202ENST00000616154 COL6A5A8TX70 2615 aa16.8■□□□□ 0.28
CDX1-202ENST00000616154 OVOL3O00110 214 aa16.8■□□□□ 0.28
CDX1-202ENST00000616154 RFXANKO14593 260 aa16.8■□□□□ 0.28
CDX1-202ENST00000616154 ADAP00813 363 aa16.8■□□□□ 0.28
CDX1-202ENST00000616154 CSTAP01040 98 aa16.8■□□□□ 0.28
CDX1-202ENST00000616154 RPS4Y1P22090 263 aaKnown RBP16.8■□□□□ 0.28
CDX1-202ENST00000616154 TNK1Q13470 666 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms