RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 GUSBP08236 651 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 SAXO2Q658L1 398 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 EMBQ6PCB8 327 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 SSX8Q7RTT4 187 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 GRINAQ7Z429 371 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 UBE2J2Q8N2K1 259 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 OR52N5Q8NH56 324 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 AENQ8WTP8 325 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 OIT3Q8WWZ8 545 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 APH1AQ96BI3 265 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 OR11A1Q9GZK7 315 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 C20orf27Q9GZN8 174 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 POLE3Q9NRF9 147 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 B3GALT5Q9Y2C3 310 aa18.31■□□□□ 0.52
TRAPPC3-208ENST00000616074 PRSS51A0A1B0GVH4 220 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 PRAMEF27A3QJZ7 478 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 CLDN24A6NM45 220 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 ANKRD28O15084 1053 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 PMS2P2O95744 297 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 C1QCP02747 245 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 TP53P04637 393 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 SERPINE1P05121 402 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 NTF4P34130 210 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 ABCE1P61221 599 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 SPOCK1Q08629 439 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 CHI3L2Q15782 390 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 ANXA8L1Q5VT79 327 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 AP1ARQ63HQ0 302 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 PIAS4Q8N2W9 510 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 TESCQ96BS2 214 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 ZHX1-C8orf76Q96EF9 292 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 NEURL3Q96EH8 262 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 BARX1Q9HBU1 254 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 HDGFL3Q9Y3E1 203 aa18.3■□□□□ 0.52
TRAPPC3-208ENST00000616074 A0A1W2PR80 420 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 CIB4A0PJX0 185 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 CD5LO43866 347 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 SSX4O60224 188 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 MYZAPP0CAP1 466 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 KHKP50053 298 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 KCNJ10P78508 379 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 CHRNEQ04844 493 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 CASP8Q14790 479 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 SPANXN4Q5MJ08 99 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 AGAP6Q5VW22 663 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 ADGRG3Q86Y34 549 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 CCDC103Q8IW40 242 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 PIGXQ8TBF5 258 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 EXOSC3Q9NQT5 275 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 MARCOQ9UEW3 520 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 RAP2CQ9Y3L5 183 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 SLC25A15Q9Y619 301 aa18.29■□□□□ 0.52
TRAPPC3-208ENST00000616074 CCT8L1PA6NM43 557 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 E7EQL1 145 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 DNPH1O43598 174 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 CCNA2P20248 432 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 ZNF83P51522 516 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 SLC16A1P53985 500 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 FOXG1P55316 489 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 HPCAP84074 193 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 NRF1Q16656 503 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 GPAT3Q53EU6 434 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 TMEM108Q6UXF1 575 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 ARFGAP2Q8N6H7 521 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 VPS37AQ8NEZ2 397 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 SPATA3Q8NHX4 192 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 RADILQ96JH8 1075 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 SORT1Q99523 831 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 SLC35A5Q9BS91 424 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 CACNG6Q9BXT2 260 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 ASB6Q9NWX5 421 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 TAS2R16Q9NYV7 291 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 MALT1Q9UDY8 824 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 ALPK2Q86TB3 2170 aa18.28■□□□□ 0.52
TRAPPC3-208ENST00000616074 HMGN4O00479 90 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 AP3D1O14617 1153 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 GPR171O14626 319 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 TLX2O43763 284 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 MRPL33O75394 65 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 PTAFRP25105 342 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 TTKP33981 857 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 CHI3L1P36222 383 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 IDH2P48735 452 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 CLK1P49759 484 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 RPL14P50914 215 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 OR2B6P58173 313 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 IRX1P78414 480 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 C11orf71Q6IPW1 123 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 SLC22A25Q6T423 547 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 B3GLCTQ6Y288 498 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 OR52E4Q8NGH9 312 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 CNOT9Q92600 299 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 TMEM109Q9BVC6 243 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 NUF2Q9BZD4 464 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 YAE1D1Q9NRH1 226 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 POU2F3Q9UKI9 436 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 MGAT4BQ9UQ53 548 aa18.27■□□□□ 0.52
TRAPPC3-208ENST00000616074 IGHV4-30-2A0A087WSY4 118 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms