RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 SPATA19Q7Z5L4 167 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 GALNT5Q7Z7M9 940 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 ZNF100Q8IYN0 542 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 ARFGAP2Q8N6H7 521 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 PIWIL2Q8TC59 973 aaKnown RBP13.11□□□□□ -0.31
PRKN-211ENST00000615065 PNPT1Q8TCS8 783 aaKnown RBP13.11□□□□□ -0.31
PRKN-211ENST00000615065 MGARPQ8TDB4 240 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 OR52E6Q96RD3 313 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 PANX1Q96RD7 426 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 SLC38A1Q9H2H9 487 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 ESRP2Q9H6T0 727 aaKnown RBP13.11□□□□□ -0.31
PRKN-211ENST00000615065 NGBQ9NPG2 151 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 EXOSC3Q9NQT5 275 aaKnown RBP13.11□□□□□ -0.31
PRKN-211ENST00000615065 GPR45Q9Y5Y3 372 aa13.11□□□□□ -0.31
PRKN-211ENST00000615065 SPIN1Q9Y657 262 aaPredicted RBP13.11□□□□□ -0.31
PRKN-211ENST00000615065 IGKV3D-15A0A087WSY6 115 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 DPRXA6NFQ7 191 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 ZNF716A6NP11 495 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 TMCC2O75069 709 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
PRKN-211ENST00000615065 PMS2P2O95744 297 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 GSNP06396 782 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 SOD3P08294 240 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 KITP10721 976 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 CCNA2P20248 432 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 COX5AP20674 150 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 IDH2P48735 452 aaKnown RBP13.1□□□□□ -0.31
PRKN-211ENST00000615065 ZNF621Q6ZSS3 439 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 CROCCP2Q86T23 111 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 MTDHQ86UE4 582 aaKnown RBP13.1□□□□□ -0.31
PRKN-211ENST00000615065 ADGRG3Q86Y34 549 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 TRIML2Q8N7C3 387 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 FBXW5Q969U6 566 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 TRNT1Q96Q11 434 aaKnown RBP13.1□□□□□ -0.31
PRKN-211ENST00000615065 EMC3Q9P0I2 261 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 TLN2Q9Y4G6 2542 aa13.1□□□□□ -0.31
PRKN-211ENST00000615065 AGAP5A6NIR3 686 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 HDAC3O15379 428 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 RAMP1O60894 148 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 IGHV3-9P01782 118 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 RPS4Y1P22090 263 aaKnown RBP13.09□□□□□ -0.31
PRKN-211ENST00000615065 RPS4XP62701 263 aaKnown RBP13.09□□□□□ -0.31
PRKN-211ENST00000615065 PDK3Q15120 406 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 PPA1Q15181 289 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 ZNF672Q499Z4 452 aaPredicted RBP13.09□□□□□ -0.31
PRKN-211ENST00000615065 DNAJC14Q6Y2X3 702 aaPredicted RBP13.09□□□□□ -0.31
PRKN-211ENST00000615065 LRRC74BQ6ZQY2 392 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 WDR60Q8WVS4 1066 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 ZHX1-C8orf76Q96EF9 292 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 ZBTB18Q99592 522 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 USB1Q9BQ65 265 aaKnown RBP13.09□□□□□ -0.31
PRKN-211ENST00000615065 SLC6A13Q9NSD5 602 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 THAP1Q9NVV9 213 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 NPAP1Q9NZP6 1156 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 LIPT1Q9Y234 373 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 NOSIPQ9Y314 301 aaKnown RBP13.09□□□□□ -0.31
PRKN-211ENST00000615065 HDGFL3Q9Y3E1 203 aa13.09□□□□□ -0.31
PRKN-211ENST00000615065 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 TMEM72A0PK05 275 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 TRPC5OSA6NMA1 111 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 OVOL3O00110 214 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 DANCRP0C864 163 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 NR2F1P10589 423 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 GGT1P19440 569 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 NTF4P34130 210 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 OR2B6P58173 313 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 MAPK11Q15759 364 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 MRPL2Q5T653 305 aaKnown RBP13.08□□□□□ -0.32
PRKN-211ENST00000615065 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 CCDC103Q8IW40 242 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 CMIPQ8IY22 773 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 UBE2J2Q8N2K1 259 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 ZNF433Q8N7K0 673 aaPredicted RBP13.08□□□□□ -0.32
PRKN-211ENST00000615065 PIGXQ8TBF5 258 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 SMAP2Q8WU79 429 aaPredicted RBP13.08□□□□□ -0.32
PRKN-211ENST00000615065 TRIM2Q9C040 744 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 OSGIN1Q9UJX0 560 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 TMED7Q9Y3B3 224 aa13.08□□□□□ -0.32
PRKN-211ENST00000615065 MAGED1Q9Y5V3 778 aaPredicted RBP13.08□□□□□ -0.32
PRKN-211ENST00000615065 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 OR5H1A6NKK0 313 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 RFXANKO14593 260 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 DNPH1O43598 174 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 RAD51DO75771 328 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 PGM3O95394 542 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 IL7RP16871 459 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 PCSK6P29122 969 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 CDKN1AP38936 164 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 HTR3AP46098 478 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 CLK1P49759 484 aaKnown RBP13.07□□□□□ -0.32
PRKN-211ENST00000615065 ANXA11P50995 505 aaKnown RBP13.07□□□□□ -0.32
PRKN-211ENST00000615065 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
PRKN-211ENST00000615065 SLC16A1P53985 500 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 TXNL4AP83876 142 aaKnown RBP13.07□□□□□ -0.32
PRKN-211ENST00000615065 LRRC74AQ0VAA2 488 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 FAPQ12884 760 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 TNK1Q13470 666 aa13.07□□□□□ -0.32
PRKN-211ENST00000615065 PGGHGQ32M88 737 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms