RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MTDHQ86UE4 582 aaKnown RBP20.16■□□□□ 0.82
FAM228B-208ENST00000613899 HSD17B8Q92506 261 aa20.16■□□□□ 0.82
FAM228B-208ENST00000613899 CNOT9Q92600 299 aaKnown RBP20.16■□□□□ 0.82
FAM228B-208ENST00000613899 TMEM204Q9BSN7 226 aa20.16■□□□□ 0.82
FAM228B-208ENST00000613899 MTHFD2LQ9H903 347 aaPredicted RBP20.16■□□□□ 0.82
FAM228B-208ENST00000613899 SDR39U1Q9NRG7 319 aaPredicted RBP20.16■□□□□ 0.82
FAM228B-208ENST00000613899 ZNF814B7Z6K7 855 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 UBDO15205 165 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 TMCC2O75069 709 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 ANP32DO95626 131 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 CNOT4O95628 575 aaKnown RBP20.15■□□□□ 0.82
FAM228B-208ENST00000613899 DBIP07108 87 aaKnown RBP20.15■□□□□ 0.82
FAM228B-208ENST00000613899 IDH2P48735 452 aaKnown RBP20.15■□□□□ 0.82
FAM228B-208ENST00000613899 TSC22D1Q15714 1073 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 TAB1Q15750 504 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 ALKBH2Q6NS38 261 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 PRSS57Q6UWY2 283 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 BHLHA15Q7RTS1 189 aaPredicted RBP20.15■□□□□ 0.82
FAM228B-208ENST00000613899 MAVSQ7Z434 540 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 PEX5LQ8IYB4 626 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 PIGXQ8TBF5 258 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 CALML5Q9NZT1 146 aa20.15■□□□□ 0.82
FAM228B-208ENST00000613899 IGKV3D-15A0A087WSY6 115 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 FAAHO00519 579 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 HS3ST1O14792 307 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ADAM11O75078 769 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ZCCHC18P0CG32 403 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 POLR2HP52434 150 aaKnown RBP20.14■□□□□ 0.81
FAM228B-208ENST00000613899 MRPL2Q5T653 305 aaKnown RBP20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ADGRG3Q86Y34 549 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF440Q8IYI8 595 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF100Q8IYN0 542 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 TMEM171Q8WVE6 324 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF75CPQ92670 426 aaPredicted RBP20.14■□□□□ 0.81
FAM228B-208ENST00000613899 DDIT4LQ96D03 193 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 PERPQ96FX8 193 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ITCHQ96J02 903 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ARL5BQ96KC2 179 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 OR52B2Q96RD2 323 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 GSX2Q9BZM3 304 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 ESRP2Q9H6T0 727 aaKnown RBP20.14■□□□□ 0.81
FAM228B-208ENST00000613899 PRSS50Q9UI38 385 aa20.14■□□□□ 0.81
FAM228B-208ENST00000613899 CFAP73A6NFT4 308 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 AP3D1O14617 1153 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 PLAUP00749 431 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 ADSLP30566 484 aaPredicted RBP20.13■□□□□ 0.81
FAM228B-208ENST00000613899 CRATP43155 626 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 POLR2JP52435 117 aaKnown RBP20.13■□□□□ 0.81
FAM228B-208ENST00000613899 MAP2K6P52564 334 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 CRISP3P54108 245 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 AGBL2Q5U5Z8 902 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 SSX8Q7RTT4 187 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 MIER2Q8N344 545 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF611Q8N823 705 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF775Q96BV0 537 aaPredicted RBP20.13■□□□□ 0.81
FAM228B-208ENST00000613899 OR11A1Q9GZK7 315 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 GSX1Q9H4S2 264 aaPredicted RBP20.13■□□□□ 0.81
FAM228B-208ENST00000613899 CXorf56Q9H5V9 222 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 TPT1P8Q9HAU6 139 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 SLC6A13Q9NSD5 602 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 THUMPD1Q9NXG2 353 aaKnown RBP20.13■□□□□ 0.81
FAM228B-208ENST00000613899 RNF115Q9Y4L5 304 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 USH1CQ9Y6N9 552 aa20.13■□□□□ 0.81
FAM228B-208ENST00000613899 DSPPQ9NZW4 1301 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 TMED7-TICAM2A0A0A6YYA0 188 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF716A6NP11 495 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 GPR171O14626 319 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 ZNF208O43345 1280 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 LYZL6O75951 148 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 INHBBP09529 407 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 COX5AP20674 150 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 SLC1A3P43003 542 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 MVDP53602 400 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 DSTNP60981 165 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 EPS8Q12929 822 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 CAPRIN1Q14444 709 aaKnown RBP20.12■□□□□ 0.81
FAM228B-208ENST00000613899 LIN52Q52LA3 116 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 C6orf10Q5SRN2 563 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 NCMAPQ5T1S8 102 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 OR9I1Q8NGQ6 314 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 IGFBPL1Q8WX77 278 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 AKAP1Q92667 903 aaKnown RBP eCLIP20.12■□□□□ 0.81
FAM228B-208ENST00000613899 C7orf26Q96N11 449 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 TMEM181Q9P2C4 612 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 OSGIN1Q9UJX0 560 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 PRDM4Q9UKN5 801 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 TRAPPC4Q9Y296 219 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 NOSIPQ9Y314 301 aaKnown RBP20.12■□□□□ 0.81
FAM228B-208ENST00000613899 TMED7Q9Y3B3 224 aa20.12■□□□□ 0.81
FAM228B-208ENST00000613899 TMEM247A6NEH6 219 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 BCHEP06276 602 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 CD3EP07766 207 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 ETFAP13804 333 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 CCNA2P20248 432 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 TACR3P29371 465 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 PTH2RP49190 550 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 SLC16A1P53985 500 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 STK11Q15831 433 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 ADAM5Q6NVV9 412 aa20.11■□□□□ 0.81
FAM228B-208ENST00000613899 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms