RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ARHGDIGQ99819 225 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 VPS29Q9UBQ0 182 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SPATA31A1Q5TZJ5 1347 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GTF2A2P52657 109 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 OR5M9Q8NGP3 310 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GPR119Q8TDV5 335 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RTP4Q96DX8 246 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SCLYQ96I15 445 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 PRR14Q9BWN1 585 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 CD244Q9BZW8 370 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 PCBD2Q9H0N5 130 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 POPDC3Q9HBV1 291 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 LOC285556D6RIA3 1793 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 HMX2A2RU54 273 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF726A6NNF4 738 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 F5H5T6 163 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SCAMP2O15127 329 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 CACNG1Q06432 222 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GUCA2BQ16661 112 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 ANKRD16Q6P6B7 361 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 NLGN4XQ8N0W4 816 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 FAM160A2Q8N612 972 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 NLGN4YQ8NFZ3 816 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 OR13C4Q8NGS5 318 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 NETO1Q8TDF5 533 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 KIRREL1Q96J84 757 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 C2orf88Q9BSF0 95 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GPR87Q9BY21 358 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 FKBP11Q9NYL4 201 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SUSD2Q9UGT4 822 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 EBLN1P0CF75 366 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RPA2P15927 270 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 POU3F3P20264 500 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 HENMT1Q5T8I9 393 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 OR56A1Q8NGH5 318 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 M1APQ8TC57 530 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SLCO4A1Q96BD0 722 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 CNN2Q99439 309 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 FBXO7Q9Y3I1 522 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM184BQ9Y519 407 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SLC22A31A6NKX4 558 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 HOXB3P14651 431 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RPL29P47914 159 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF84P51523 738 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 DHRS7BQ6IAN0 325 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 AKR1E2Q96JD6 320 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RBP7Q96R05 134 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RALYQ9UKM9 306 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 YTHDF2Q9Y5A9 579 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 OR6C68A6NDL8 312 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 BLOC1S5-TXNDC5H3BN57 136 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 H7BYZ3 331 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 PCDH7O60245 1069 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GPR137BO60478 399 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 CHRM4P08173 479 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 TBXA2RP21731 343 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 CRISP3P54108 245 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 ADIGQ0VDE8 80 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SEZ6Q53EL9 994 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RAB11FIP5Q9BXF6 653 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 ZCCHC4Q9H5U6 513 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SLC35D1Q9NTN3 355 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 KCNG2Q9UJ96 466 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 MRPL42Q9Y6G3 142 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 A8MXK9 166 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 VIPR1P32241 457 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 PPP1R8Q12972 351 aaKnown RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 CAPSQ13938 189 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GRB7Q14451 532 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF620Q6ZNG0 422 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 C11orf42Q8N5U0 333 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RHOVQ96L33 236 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 SEC61A2Q9H9S3 476 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 RRAGCQ9HB90 399 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 DLL4Q9NR61 685 aa4.65□□□□□ -1.67
VPS13D-213ENST00000613099 DNMT3AQ9Y6K1 912 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-213ENST00000613099 GTPBP1O00178 669 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SURF4O15260 269 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GPX5O75715 221 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 BMP5P22003 454 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 AKT2P31751 481 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 LSSP48449 732 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 LMAN2Q12907 356 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ENDOGQ14249 297 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 VWA2Q5GFL6 755 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF468Q5VIY5 522 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GDPD4Q6W3E5 623 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ASB16Q96NS5 453 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GPER1Q99527 375 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 PIM2Q9P1W9 311 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GNG13Q9P2W3 67 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 LILRB3O75022 631 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 BPNT1O95861 308 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ITGB7P26010 798 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ECH1Q13011 328 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 BTNL3Q6UXE8 466 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TSTD1Q8NFU3 115 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 PITX2Q99697 317 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 LRFN3Q9BTN0 628 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF426Q9BUY5 554 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms