RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 DMRTB1Q96MA1 342 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 ZNF559Q9BR84 538 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 MARVELD1Q9BSK0 173 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 RANGRFQ9HD47 186 aaPredicted RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 FAM60AQ9NP50 221 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 MALT1Q9UDY8 824 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 KLHL21Q9UJP4 597 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 BAIAP2Q9UQB8 552 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 UNC13CQ8NB66 2214 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 DVL2O14641 736 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 SOX30O94993 753 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 MT-ND5P03915 603 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 GUSBP08236 651 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 NT5EP21589 574 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 DRD5P21918 477 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 TAS2R43P59537 309 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 POU6F2P78424 691 aaPredicted RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 OGFOD3Q6PK18 319 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 PRSS41Q7RTY9 318 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 WDR5BQ86VZ2 330 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 LRRC28Q86X40 367 aaPredicted RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 LIX1LQ8IVB5 337 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 TMEM52Q8NDY8 209 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 OR5M3Q8NGP4 307 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 OR13C2Q8NGS9 318 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 OR5W2Q8NH69 310 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 SLC2A12Q8TD20 617 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 TGM7Q96PF1 710 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 TEAD3Q99594 435 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 MAP3K3Q99759 626 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 NDC1Q9BTX1 674 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 ZNF426Q9BUY5 554 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 NDEL1Q9GZM8 345 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 MEPEQ9NQ76 525 aaPredicted RBP13.54□□□□□ -0.24
CDH1-213ENST00000612417 CYSLTR2Q9NS75 346 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 HAO2Q9NYQ3 351 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 NCOR1O75376 2440 aa13.54□□□□□ -0.24
CDH1-213ENST00000612417 TECTAO75443 2155 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 A0A0B4J2E0 115 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 A0A1B0GX12 115 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 ZC3H12DA2A288 527 aaKnown RBP13.53□□□□□ -0.24
CDH1-213ENST00000612417 TNFRSF10AO00220 468 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 CHP2O43745 196 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 SCO2O43819 266 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 PTP4A3O75365 173 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 SC5DO75845 299 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 NKX2-2O95096 273 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 PSKH1P11801 424 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 ELK1P19419 428 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 NKAIN2Q5VXU1 208 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 TPRA1Q86W33 373 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 GRAMD2AQ8IUY3 354 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 GIMAP1Q8WWP7 306 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 FYTTD1Q96QD9 318 aaKnown RBP13.53□□□□□ -0.24
CDH1-213ENST00000612417 IFT27Q9BW83 186 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 LRIT1Q9P2V4 623 aa13.53□□□□□ -0.24
CDH1-213ENST00000612417 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 ASXL3Q9C0F0 2248 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 NPIPA5A0A0B4J1W7 369 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 FAM240BA0A1B0GVZ2 78 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 RIIAD1A6NNX1 92 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 NPIPA7E9PJI5 369 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 HCRTR1O43613 425 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 GALR3O60755 368 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 SLC43A1O75387 559 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 SBK2P0C263 348 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 NPIPA8P0DM63 369 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 SAGP10523 405 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 THBS2P35442 1172 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 ARRB1P49407 418 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 C17orf82Q86X59 251 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 MCATQ8IVS2 390 aaKnown RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 UBE2J2Q8N2K1 259 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 NLGN4YQ8NFZ3 816 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 OR10H4Q8NGA5 316 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 LILRB4Q8NHJ6 448 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 UBASH3BQ8TF42 649 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 EDAQ92838 391 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 TTYH2Q9BSA4 534 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 TRAF4Q9BUZ4 470 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 ERVMER34-1Q9H9K5 563 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 ADGRL4Q9HBW9 690 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 PRMT8Q9NR22 394 aaPredicted RBP13.52□□□□□ -0.24
CDH1-213ENST00000612417 ZMIZ1Q9ULJ6 1067 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 RNF215Q9Y6U7 377 aa13.52□□□□□ -0.24
CDH1-213ENST00000612417 HRO43593 1189 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 CT62P0C5K7 136 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 ZNF3P17036 446 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 RBMS1P29558 406 aaKnown RBP13.52□□□□□ -0.25
CDH1-213ENST00000612417 GABRA3P34903 492 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 RBM34P42696 430 aaKnown RBP13.52□□□□□ -0.25
CDH1-213ENST00000612417 RFX3P48380 749 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 POU4F2Q12837 409 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 EXOSC7Q15024 291 aaKnown RBP13.52□□□□□ -0.25
CDH1-213ENST00000612417 KLHL12Q53G59 568 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 IDNKQ5T6J7 187 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 FIGNL1Q6PIW4 674 aa13.52□□□□□ -0.25
CDH1-213ENST00000612417 PXKQ7Z7A4 578 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms