RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RAB8BQ92930 207 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 ROPN1LQ96C74 230 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 ZHX1-C8orf76Q96EF9 292 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 NEURL3Q96EH8 262 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 EXOSC3Q9NQT5 275 aaKnown RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 CTPS2Q9NRF8 586 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 FAIMQ9NVQ4 179 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 NPAP1Q9NZP6 1156 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 ADAM21Q9UKJ8 722 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 HDGFL3Q9Y3E1 203 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 V9GYY5 206 aaPredicted RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 ZNF716A6NP11 495 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 ABCD4O14678 606 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 DNPH1O43598 174 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 SNUPNO95149 360 aaKnown RBP15.68■□□□□ 0.1
SSBP1-215ENST00000612337 PMS2P2O95744 297 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 CD8AP01732 235 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 CLK1P49759 484 aaKnown RBP15.68■□□□□ 0.1
SSBP1-215ENST00000612337 KHKP50053 298 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 RPL14P50914 215 aaKnown RBP15.68■□□□□ 0.1
SSBP1-215ENST00000612337 CDH11P55287 796 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 DMTNQ08495 405 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 CASP8Q14790 479 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 DPY19L1Q2PZI1 675 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 LRRC34Q8IZ02 419 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 PIGXQ8TBF5 258 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 ZG16BQ96DA0 208 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 RADILQ96JH8 1075 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 ARL5BQ96KC2 179 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 C20orf27Q9GZN8 174 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 BARX1Q9HBU1 254 aaPredicted RBP15.68■□□□□ 0.1
SSBP1-215ENST00000612337 NOSIPQ9Y314 301 aaKnown RBP15.68■□□□□ 0.1
SSBP1-215ENST00000612337 FBN3Q75N90 2809 aa15.68■□□□□ 0.1
SSBP1-215ENST00000612337 RTTNQ86VV8 2226 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 GPR171O14626 319 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 RYKP34925 604 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 CHI3L1P36222 383 aaPredicted RBP15.67■□□□□ 0.1
SSBP1-215ENST00000612337 SLC16A1P53985 500 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 CLNS1AP54105 237 aaKnown RBP15.67■□□□□ 0.1
SSBP1-215ENST00000612337 KCNJ10P78508 379 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 SPANXN4Q5MJ08 99 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 ADGRG3Q86Y34 549 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 KIRREL3Q8IZU9 778 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 UBE2J2Q8N2K1 259 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 MREGQ8N565 214 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 ARFGAP2Q8N6H7 521 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 APH1AQ96BI3 265 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 HS6ST2Q96MM7 605 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 SORT1Q99523 831 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 PARD6BQ9BYG5 372 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 SSU72Q9NP77 194 aaKnown RBP15.67■□□□□ 0.1
SSBP1-215ENST00000612337 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.67■□□□□ 0.1
SSBP1-215ENST00000612337 MARCOQ9UEW3 520 aaPredicted RBP15.67■□□□□ 0.1
SSBP1-215ENST00000612337 HAO1Q9UJM8 370 aa15.67■□□□□ 0.1
SSBP1-215ENST00000612337 ALPK2Q86TB3 2170 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 PRAMEF27A3QJZ7 478 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 TM9SF1O15321 606 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 NDUFS7O75251 213 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 RAD51DO75771 328 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 IGHV3-9P01782 118 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 DHRS4L1P0CG22 281 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 LBPP18428 481 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 HTR3AP46098 478 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 SLC1A6P48664 564 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 HPCAP84074 193 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 PLAURQ03405 335 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 CHRNEQ04844 493 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 KRT71Q3SY84 523 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 GPAT3Q53EU6 434 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 AGAP6Q5VW22 663 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 TMEM108Q6UXF1 575 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 CCDC115Q96NT0 180 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 SLC35A5Q9BS91 424 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 OR11A1Q9GZK7 315 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 ASB6Q9NWX5 421 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 MALT1Q9UDY8 824 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 GDF2Q9UK05 429 aaPredicted RBP15.66■□□□□ 0.1
SSBP1-215ENST00000612337 MGAT4BQ9UQ53 548 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 TRAPPC4Q9Y296 219 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 STAB1Q9NY15 2570 aa15.66■□□□□ 0.1
SSBP1-215ENST00000612337 CIB4A0PJX0 185 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 CLDN24A6NM45 220 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 E9PBE3 544 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 HMGN4O00479 90 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 RGS16O15492 202 aaPredicted RBP15.65■□□□□ 0.1
SSBP1-215ENST00000612337 ADAM11O75078 769 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 MRPL33O75394 65 aaKnown RBP15.65■□□□□ 0.1
SSBP1-215ENST00000612337 TP53P04637 393 aaPredicted RBP15.65■□□□□ 0.1
SSBP1-215ENST00000612337 S100A3P33764 101 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 NTF4P34130 210 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 IDH2P48735 452 aaKnown RBP15.65■□□□□ 0.1
SSBP1-215ENST00000612337 NRF1Q16656 503 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 FAM174BQ3ZCQ3 159 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 KLHL17Q6TDP4 642 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 HMGN2P46Q86SG4 172 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 CCDC103Q8IW40 242 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 CMIPQ8IY22 773 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 OR52N5Q8NH56 324 aa15.65■□□□□ 0.1
SSBP1-215ENST00000612337 DNAJA3Q96EY1 480 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms