RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	CFL1	P23528	166 aa	Known RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	GRK5	P34947	590 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	VEGFB	P49765	207 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	DUSP5	Q16690	384 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	FAM76B	Q5HYJ3	339 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	SPIN3	Q5JUX0	258 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	SAXO2	Q658L1	398 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	OR4K17	Q8NGC6	315 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	PLA2G12A	Q9BZM1	189 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	IL23A	Q9NPF7	189 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	CACNA1E	Q15878	2313 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	LRIT2	A6NDA9	550 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	KDM4E	B2RXH2	506 aa	Predicted RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571		B4DXG7	233 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	OR1D4	P47884	311 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	MAPK14	Q16539	360 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	PHF19	Q5T6S3	580 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	AMER3	Q8N944	861 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	PNLDC1	Q8NA58	520 aa	Known RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	DVL3	Q92997	716 aa	Predicted RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	UCN3	Q969E3	161 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	PDE7B	Q9NP56	450 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	COPZ2	Q9P299	210 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	NEU3	Q9UQ49	428 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	KCNE3	Q9Y6H6	103 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	C17orf113	A0A1B0GUU1	675 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571		A0A1B0GWA3	101 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	RFXAP	O00287	272 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	DCN	P07585	359 aa	Known RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	CTSL	P07711	333 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	KIAA1024L	P59773	190 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	IFITM3	Q01628	133 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	LCN10	Q6JVE6	187 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	ZNF765	Q7L2R6	523 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	KANSL1	Q7Z3B3	1105 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	CCDC71	Q8IV32	467 aa	Predicted RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	KDM8	Q8N371	416 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	OR13C3	Q8NGS6	347 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	ZC3H10	Q96K80	434 aa	Known RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	SERINC2	Q96SA4	455 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	GABARAPL3	Q9BY60	117 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	NOX4	Q9NPH5	578 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	INIP	Q9NRY2	104 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	NUBP2	Q9Y5Y2	271 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	TMEM14A	Q9Y6G1	99 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	PIAS3	Q9Y6X2	628 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	LAMB2	P55268	1798 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	C17orf105	B2RV13	164 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	GPR75	O95800	540 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	SLC2A5	P22732	501 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	RPS5	P46782	204 aa	Known RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	RIDA	P52758	137 aa	Known RBP	12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	POU4F2	Q12837	409 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	PDE7A	Q13946	482 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	GBX1	Q14549	363 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	RAB11B	Q15907	218 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	DNM1P34	Q6PK57	102 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	MFSD4A	Q8N468	514 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	FAM109A	Q8N4B1	249 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	TMEM156	Q8N614	296 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	CDCA4	Q9BXL8	241 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	ADAM18	Q9Y3Q7	739 aa		12.88	□□□□□ -0.35
MUC1-223	ENST00000611571	ZNF318	Q5VUA4	2279 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	KNG1	P01042	644 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	CFI	P05156	583 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	SYP	P08247	313 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	TM4SF4	P48230	202 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	UBE2M	P61081	183 aa	Known RBP	12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	LSM11	P83369	360 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	GPR176	Q14439	515 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	C3P1	Q6ZMU1	363 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	NDUFAF7	Q7L592	441 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	TMEM17	Q86X19	198 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	LRRC56	Q8IYG6	542 aa	Predicted RBP	12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	SIMC1	Q8NDZ2	872 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	OR7G1	Q8NGA0	311 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	NRSN2	Q9GZP1	204 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	ISG20L2	Q9H9L3	353 aa	Known RBP	12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	FGF22	Q9HCT0	170 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	SERINC1	Q9NRX5	453 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	PLCXD1	Q9NUJ7	323 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	UNC13C	Q8NB66	2214 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571		H3BQ06	376 aa	Predicted RBP	12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	ICMT	O60725	284 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	PRAMEF4	O60810	478 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	TIMP1	P01033	207 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	CLU	P10909	449 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	CXADR	P78310	365 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	PRAMEF9	Q5VWM5	478 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	TMEM151B	Q8IW70	566 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	TEX19	Q8NA77	164 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	DNAAF1	Q8NEP3	725 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	CCL4L1	Q8NHW4	92 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	TMEM106A	Q96A25	262 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	MAN2C1	Q9NTJ4	1040 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	PRSS38	A1L453	326 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	TRAPPC6A	O75865	159 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	NTN1	O95631	604 aa		12.87	□□□□□ -0.35
MUC1-223	ENST00000611571	SFTPD	P35247	375 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms