RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 C7orf57Q8NEG2 295 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 PRSS33Q8NF86 280 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 BBS1Q8NFJ9 593 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 SNRNP27Q8WVK2 155 aaKnown RBP11.24□□□□□ -0.61
TP53-219ENST00000610538 RORBQ92753 470 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 TAAR9Q96RI9 348 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 CDC6Q99741 560 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 NPAS1Q99742 590 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 IFT27Q9BW83 186 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 MED20Q9H944 212 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 KRCC1Q9NPI7 259 aaPredicted RBP11.24□□□□□ -0.61
TP53-219ENST00000610538 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 SIGLEC7Q9Y286 467 aa11.24□□□□□ -0.61
TP53-219ENST00000610538 IGHV1-45A0A0A0MS14 117 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 OR6C70A6NIJ9 312 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 MAGEB3O15480 346 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 FADS1O60427 444 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 PPM1BO75688 479 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 FOLR3P41439 243 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ENTPD1P49961 510 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 PRSS12P56730 875 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 E2F1Q01094 437 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 WBP2NLQ6ICG8 309 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 LINC00114Q6XXX2 140 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 PRSS48Q7RTY5 328 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 OR2T33Q8NG76 320 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 OR11G2Q8NGC1 345 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ZNF420Q8TAQ5 688 aaPredicted RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 DNAJA4Q8WW22 397 aaPredicted RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 LRFN5Q96NI6 719 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ZNF426Q9BUY5 554 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 NXT1Q9UKK6 140 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 CDH10Q9Y6N8 788 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ZC3H12DA2A288 527 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 BLOC1S5-TXNDC5H3BN57 136 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 MPZL2O60487 215 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 SERPINI2O75830 405 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 CDK1P06493 297 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 COX6A1P12074 109 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 TGM1P22735 817 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 F8A1P23610 371 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ADH7P40394 386 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 RAB15P59190 212 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 SNRPGP62308 76 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 LSM3P62310 102 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 CSRP2Q16527 193 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 STPG1Q5TH74 334 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 IL20RBQ6UXL0 311 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 Q6ZNX1 250 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 TMPRSS11FQ6ZWK6 438 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 CYB561A3Q8NBI2 242 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 OR5L2Q8NGL0 311 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 OR13F1Q8NGS4 319 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 CT55Q8WUE5 264 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 MYDGFQ969H8 173 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 TP53INP1Q96A56 240 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ZNF582Q96NG8 517 aaPredicted RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 POLDIP3Q9BY77 421 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 POLR2J2Q9GZM3 115 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 ANKRD10Q9NXR5 420 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 MED11Q9P086 117 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 TCFL5Q9UL49 500 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ICAM5Q9UMF0 924 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 VDAC3Q9Y277 283 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 DMXL2Q8TDJ6 3036 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 EML6Q6ZMW3 1958 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 MGAQ8IWI9 3026 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ZNF99A8MXY4 864 aaPredicted RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 ITGA10O75578 1167 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 NOS3P29474 1203 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 EFNB1P98172 346 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ZNF91Q05481 1191 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 COL28A1Q2UY09 1125 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ZBTB46Q86UZ6 589 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 C17orf47Q8NEP4 570 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 NUBPLQ8TB37 319 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 TRUB1Q8WWH5 349 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 KTI12Q96EK9 354 aaPredicted RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 MOGAT1Q96PD6 335 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 SLC38A2Q96QD8 506 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 RASL10BQ96S79 203 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 LAT2Q9GZY6 243 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 PLCXD1Q9NUJ7 323 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 KLRF1Q9NZS2 232 aa11.23□□□□□ -0.61
TP53-219ENST00000610538 PPIEQ9UNP9 301 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 MRPS18BQ9Y676 258 aaKnown RBP11.23□□□□□ -0.61
TP53-219ENST00000610538 COL27A1Q8IZC6 1860 aaPredicted RBP11.22□□□□□ -0.61
TP53-219ENST00000610538 NSG1A0A0A6YYJ2 146 aa11.22□□□□□ -0.61
TP53-219ENST00000610538 SHISA8B8ZZ34 492 aa11.22□□□□□ -0.61
TP53-219ENST00000610538 SURF4O15260 269 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms