RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 LOXP28300 417 aaPredicted RBP11.74□□□□□ -0.53
TOM1-218ENST00000608674 OR3A2P47893 321 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 CLK1P49759 484 aaKnown RBP11.74□□□□□ -0.53
TOM1-218ENST00000608674 POLR2JP52435 117 aaKnown RBP11.74□□□□□ -0.53
TOM1-218ENST00000608674 OR2B6P58173 313 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 ITGADQ13349 1161 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 TSC22D1Q15714 1073 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 Q5PR19 223 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 C6orf10Q5SRN2 563 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 AGBL2Q5U5Z8 902 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 Q6ZT83 130 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 MSANTD1Q6ZTZ1 278 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 BHLHA15Q7RTS1 189 aaPredicted RBP11.74□□□□□ -0.53
TOM1-218ENST00000608674 ZNF440Q8IYI8 595 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 MIER2Q8N344 545 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 OR52B2Q96RD2 323 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 ZNF300Q96RE9 604 aaPredicted RBP11.74□□□□□ -0.53
TOM1-218ENST00000608674 DLL4Q9NR61 685 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 SDR39U1Q9NRG7 319 aaPredicted RBP11.74□□□□□ -0.53
TOM1-218ENST00000608674 CALML5Q9NZT1 146 aa11.74□□□□□ -0.53
TOM1-218ENST00000608674 TMED7-TICAM2A0A0A6YYA0 188 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 ZNF814B7Z6K7 855 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 GPR171O14626 319 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 PMS2P2O95744 297 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 ADSLP30566 484 aaPredicted RBP11.73□□□□□ -0.53
TOM1-218ENST00000608674 SLC1A3P43003 542 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 POLR2HP52434 150 aaKnown RBP11.73□□□□□ -0.53
TOM1-218ENST00000608674 CRISP3P54108 245 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 STX1BP61266 288 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 PDK3Q15120 406 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 STK11Q15831 433 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 MAVSQ7Z434 540 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 ADGRG3Q86Y34 549 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 UBE2J2Q8N2K1 259 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 PIGXQ8TBF5 258 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 LRRC8CQ8TDW0 803 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 DNAJA3Q96EY1 480 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 PERPQ96FX8 193 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 ARL5BQ96KC2 179 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 POTEKPQ9BYX7 375 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 OR11A1Q9GZK7 315 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 ESRP2Q9H6T0 727 aaKnown RBP11.73□□□□□ -0.53
TOM1-218ENST00000608674 TPT1P8Q9HAU6 139 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 THUMPD1Q9NXG2 353 aaKnown RBP11.73□□□□□ -0.53
TOM1-218ENST00000608674 ING1Q9UK53 422 aaPredicted RBP11.73□□□□□ -0.53
TOM1-218ENST00000608674 NOSIPQ9Y314 301 aaKnown RBP11.73□□□□□ -0.53
TOM1-218ENST00000608674 TMED7Q9Y3B3 224 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 USH1CQ9Y6N9 552 aa11.73□□□□□ -0.53
TOM1-218ENST00000608674 CSPG4Q6UVK1 2322 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 FREM1Q5H8C1 2179 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 FAM234BA2RU67 622 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 AP3D1O14617 1153 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 HS3ST1O14792 307 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 CLOCKO15516 846 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 DNPH1O43598 174 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 LYZL6O75951 148 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 PLAUP00749 431 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 CD3EP07766 207 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 ZCCHC18P0CG32 403 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 ETFAP13804 333 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 TACR3P29371 465 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 DSTNP60981 165 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 COPZ1P61923 177 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 LARS2Q15031 903 aaKnown RBP11.72□□□□□ -0.53
TOM1-218ENST00000608674 TAB1Q15750 504 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 LIN52Q52LA3 116 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 MRPL2Q5T653 305 aaKnown RBP11.72□□□□□ -0.53
TOM1-218ENST00000608674 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
TOM1-218ENST00000608674 BIVMQ86UB2 503 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 OR52P1PQ8NH57 321 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 AKAP1Q92667 903 aaKnown RBP eCLIP11.72□□□□□ -0.53
TOM1-218ENST00000608674 VPS33AQ96AX1 596 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 MUCL1Q96DR8 90 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 NAA11Q9BSU3 229 aaPredicted RBP11.72□□□□□ -0.53
TOM1-218ENST00000608674 GSX1Q9H4S2 264 aaPredicted RBP11.72□□□□□ -0.53
TOM1-218ENST00000608674 CXorf56Q9H5V9 222 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 ARMC7Q9H6L4 198 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 SLC6A13Q9NSD5 602 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 TMEM181Q9P2C4 612 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 PRSS50Q9UI38 385 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 OSGIN1Q9UJX0 560 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 ZNF232Q9UNY5 417 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 TRAPPC4Q9Y296 219 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 RNF115Q9Y4L5 304 aa11.72□□□□□ -0.53
TOM1-218ENST00000608674 CADP27708 2225 aa11.71□□□□□ -0.53
TOM1-218ENST00000608674 DSCAMO60469 2012 aa11.71□□□□□ -0.53
TOM1-218ENST00000608674 NSD1Q96L73 2696 aaPredicted RBP11.71□□□□□ -0.53
TOM1-218ENST00000608674 IGKV3D-15A0A087WSY6 115 aa11.71□□□□□ -0.53
TOM1-218ENST00000608674 CCT8L1PA6NM43 557 aa11.71□□□□□ -0.53
TOM1-218ENST00000608674 FAAHO00519 579 aa11.71□□□□□ -0.53
TOM1-218ENST00000608674 POLR3GO15318 223 aaPredicted RBP11.71□□□□□ -0.53
TOM1-218ENST00000608674 ZNF208O43345 1280 aa11.71□□□□□ -0.53
TOM1-218ENST00000608674 EIF1BO60739 113 aaKnown RBP11.71□□□□□ -0.53
TOM1-218ENST00000608674 ADAM11O75078 769 aa11.71□□□□□ -0.53
TOM1-218ENST00000608674 MRPL33O75394 65 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms