RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 GP6Q9HCN6 339 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 BCL2L10Q9HD36 194 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 A4GALTQ9NPC4 353 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 FGFR1OP2Q9NVK5 253 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 CALML5Q9NZT1 146 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 NDRG3Q9UGV2 375 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 ST6GALNAC2Q9UJ37 374 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 DCTN4Q9UJW0 460 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 OSGIN1Q9UJX0 560 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 ZNF443Q9Y2A4 671 aaPredicted RBP14.2□□□□□ -0.14
SFXN2-208ENST00000602660 C2CD3Q4AC94 2353 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 VPS13CQ709C8 3753 aa14.2□□□□□ -0.14
SFXN2-208ENST00000602660 CHD3Q12873 2000 aaKnown RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 GCM2O75603 506 aaPredicted RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 PRKD3O94806 890 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 THBDP07204 575 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 THBS1P07996 1170 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 VIMP08670 466 aaKnown RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 PABPC4LP0CB38 370 aaKnown RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 GKN3PP0CG01 181 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 CRYGSP22914 178 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 KCNJ5P48544 419 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 IRX1P78414 480 aaPredicted RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 EXOC3L2Q2M3D2 409 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 RNF220Q5VTB9 566 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 ANKRD34AQ69YU3 496 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 GTF2IRD2BQ6EKJ0 949 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 DLEU7Q6UYE1 221 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 GTF2IRD2Q86UP8 949 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 SLC43A2Q8N370 569 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 REXO5Q96IC2 774 aaKnown RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 ZNF300Q96RE9 604 aaPredicted RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 KLHL4Q9C0H6 718 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 ADAM19Q9H013 955 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 CCDC134Q9H6E4 229 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 SERINC1Q9NRX5 453 aa14.19□□□□□ -0.14
SFXN2-208ENST00000602660 THUMPD1Q9NXG2 353 aaKnown RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 C6orf203Q9P0P8 240 aaPredicted RBP14.19□□□□□ -0.14
SFXN2-208ENST00000602660 ARFGEF3Q5TH69 2177 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 TMED7-TICAM2A0A0A6YYA0 188 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 A0A0G2JPF8 293 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 A0A1W2PP18 115 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 TMEM72A0PK05 275 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 ZC3H12DA2A288 527 aaKnown RBP14.18□□□□□ -0.14
SFXN2-208ENST00000602660 CFAP73A6NFT4 308 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 HNRNPCL2B2RXH8 293 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 ZNF814B7Z6K7 855 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 HNRNPCL3B7ZW38 293 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 HNRNPCL1O60812 293 aaKnown RBP14.18□□□□□ -0.14
SFXN2-208ENST00000602660 FESP07332 822 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 YES1P07947 543 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 HNRNPCL4P0DMR1 293 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 TROVE2P10155 538 aaKnown RBP eCLIP14.18□□□□□ -0.14
SFXN2-208ENST00000602660 ARAFP10398 606 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 PRG2P13727 222 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 TACR3P29371 465 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 LIN52Q52LA3 116 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 PRAMEF8Q5VWM4 474 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 PRAMEF7Q5VXH5 474 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 ABLIM2Q6H8Q1 611 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 PAMR1Q6UXH9 720 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 SPNS3Q6ZMD2 512 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 RETREG3Q86VR2 466 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 GABRG1Q8N1C3 465 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 NINJ1Q92982 152 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 DNAJA3Q96EY1 480 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 MED18Q9BUE0 208 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 PLEKHA6Q9Y2H5 1048 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 TMED7Q9Y3B3 224 aa14.18□□□□□ -0.14
SFXN2-208ENST00000602660 ZNF716A6NP11 495 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 SULT2B1O00204 365 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 RAMP1O60894 148 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 PMS2P2O95744 297 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 GPX2P18283 190 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 CCNA2P20248 432 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 PSMB1P20618 241 aaKnown RBP14.17□□□□□ -0.14
SFXN2-208ENST00000602660 SLC1A3P43003 542 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 POLR2HP52434 150 aaKnown RBP14.17□□□□□ -0.14
SFXN2-208ENST00000602660 H3F3AP84243 136 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 RASGEF1BQ0VAM2 473 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 GNA13Q14344 377 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 TMEM201Q5SNT2 666 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 CGB2Q6NT52 195 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 BEND4Q6ZU67 534 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 MTDHQ86UE4 582 aaKnown RBP14.17□□□□□ -0.14
SFXN2-208ENST00000602660 COMTD1Q86VU5 262 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 ZNF440Q8IYI8 595 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 ZC3HAV1LQ96H79 300 aaKnown RBP14.17□□□□□ -0.14
SFXN2-208ENST00000602660 CPPED1Q9BRF8 314 aaPredicted RBP14.17□□□□□ -0.14
SFXN2-208ENST00000602660 SIKE1Q9BRV8 207 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 SPATA9Q9BWV2 254 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 CXXC4Q9H2H0 198 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 RAD21L1Q9H4I0 556 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 CCM2LQ9NUG4 571 aaPredicted RBP14.17□□□□□ -0.14
SFXN2-208ENST00000602660 FAM53CQ9NYF3 392 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 KLHL9Q9P2J3 617 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 HDGFL3Q9Y3E1 203 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 SPIN1Q9Y657 262 aaPredicted RBP14.17□□□□□ -0.14
SFXN2-208ENST00000602660 RTTNQ86VV8 2226 aa14.17□□□□□ -0.14
SFXN2-208ENST00000602660 IGKV3D-15A0A087WSY6 115 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms