RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 A0A1B0GWA3 101 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 TRAPPC13A5PLN9 417 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 TFECO14948 347 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 HNRNPRO43390 633 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 CHP2O43745 196 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 NUDT14O95848 222 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 IGF2P01344 180 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 FABP3P05413 133 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 PNMTP11086 282 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 TNFRSF1BP20333 461 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 RYKP34925 604 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 MAGEA5P43359 124 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 GFRA1P56159 465 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ALDH6A1Q02252 535 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ST3GAL3Q11203 375 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 TOMM34Q15785 309 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 KRTCAP3Q53RY4 240 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 CMPK2Q5EBM0 449 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 SP5Q6BEB4 398 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 LINC00114Q6XXX2 140 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 PLEKHM3Q6ZWE6 761 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ATG4DQ86TL0 474 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 TSPYL5Q86VY4 417 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 CYP4Z1Q86W10 505 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ZDHHC21Q8IVQ6 265 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 PIK3C3Q8NEB9 887 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF563Q8TA94 476 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 VANGL1Q8TAA9 524 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 POC1BQ8TC44 478 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ADAMTS16Q8TE57 1224 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 FAR1Q8WVX9 515 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC38A4Q969I6 547 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 SLCO4A1Q96BD0 722 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF524Q96C55 264 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 RSRC1Q96IZ7 334 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 SEPHS2Q99611 448 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 PIP5K1AQ99755 562 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF426Q9BUY5 554 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 CHID1Q9BWS9 393 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 DKKL1Q9UK85 242 aa10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 FAM32AQ9Y421 112 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-207ENST00000600804 MAP1AP78559 2803 aaPredicted RBP10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 A0A087WUJ7 227 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 A0A1W2PRQ8 180 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 OR2M5A3KFT3 312 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 HTR3EA5X5Y0 456 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 FAM166BA8MTA8 275 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 FFAR1O14842 300 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF208O43345 1280 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 FKBP6O75344 327 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 KRT36O76013 467 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 LYPD3O95274 346 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 ACTL6AO96019 429 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 FCGR1AP12314 374 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 HK1P19367 917 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 CLK1P49759 484 aaKnown RBP10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 TDGF1P3P51864 188 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 HMGA2P52926 109 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 SMIM11AP58511 58 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 HOXC5Q00444 222 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 PMP22Q01453 160 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 FOXF1Q12946 379 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 SELENBP1Q13228 472 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 DGCR6Q14129 220 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 BCL2A1Q16548 175 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.51□□□□□ -0.737e-10■■□□□ 13.4
CHMP2A-207ENST00000600804 AAGABQ6PD74 315 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 FAM180AQ6UWF9 173 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 C5orf46Q6UWT4 87 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 DEF8Q6ZN54 512 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 TRILQ7L0X0 811 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 MCEMP1Q8IX19 187 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 NEIL3Q8TAT5 605 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC25A43Q8WUT9 341 aaPredicted RBP10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 SLX1AQ9BQ83 275 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC19A3Q9BZV2 496 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 SELENONQ9NZV5 590 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 STOML1Q9UBI4 398 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 RPS6KB2Q9UBS0 482 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 RIMS3Q9UJD0 308 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 OSGIN1Q9UJX0 560 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 VDAC3Q9Y277 283 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 AP4S1Q9Y587 144 aa10.51□□□□□ -0.73
CHMP2A-207ENST00000600804 DNHD1Q96M86 4753 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 OR14I1A6ND48 311 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 PRSS44E7EML9 344 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 AQP7O14520 342 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 ADAMDEC1O15204 470 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 FZD7O75084 574 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 TRAPPC6AO75865 159 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 THY1P04216 161 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 STSP08842 583 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 EDN3P14138 238 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 TACR3P29371 465 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 GCKP35557 465 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 RFC3P40938 356 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 RBM34P42696 430 aaKnown RBP10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 CDH12P55289 794 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 TAS2R41P59536 307 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms