RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PIWIL2Q8TC59 973 aaKnown RBP14.01□□□□□ -0.17
VRK3-221ENST00000600284 TMEM171Q8WVE6 324 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 BDH2Q9BUT1 245 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 POTEKPQ9BYX7 375 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 CXorf56Q9H5V9 222 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 ESRP2Q9H6T0 727 aaKnown RBP14.01□□□□□ -0.17
VRK3-221ENST00000600284 ZIM2Q9NZV7 527 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 TRAPPC4Q9Y296 219 aa14.01□□□□□ -0.17
VRK3-221ENST00000600284 RAI1Q7Z5J4 1906 aaPredicted RBP14.01□□□□□ -0.17
VRK3-221ENST00000600284 FLNAP21333 2647 aaKnown RBP14.01□□□□□ -0.17
VRK3-221ENST00000600284 CLDN24A6NM45 220 aa14□□□□□ -0.17
VRK3-221ENST00000600284 C9JVG2 144 aa14□□□□□ -0.17
VRK3-221ENST00000600284 GPR171O14626 319 aa14□□□□□ -0.17
VRK3-221ENST00000600284 ZNF208O43345 1280 aa14□□□□□ -0.17
VRK3-221ENST00000600284 PLAUP00749 431 aa14□□□□□ -0.17
VRK3-221ENST00000600284 C1QCP02747 245 aa14□□□□□ -0.17
VRK3-221ENST00000600284 DBIP07108 87 aaKnown RBP14□□□□□ -0.17
VRK3-221ENST00000600284 CHRM4P08173 479 aa14□□□□□ -0.17
VRK3-221ENST00000600284 NR2F1P10589 423 aa14□□□□□ -0.17
VRK3-221ENST00000600284 IL7RP16871 459 aa14□□□□□ -0.17
VRK3-221ENST00000600284 RPS4Y1P22090 263 aaKnown RBP14□□□□□ -0.17
VRK3-221ENST00000600284 IDH2P48735 452 aaKnown RBP14□□□□□ -0.17
VRK3-221ENST00000600284 PLAURQ03405 335 aa14□□□□□ -0.17
VRK3-221ENST00000600284 BEND6Q5SZJ8 279 aaPredicted RBP14□□□□□ -0.17
VRK3-221ENST00000600284 BHLHA15Q7RTS1 189 aaPredicted RBP14□□□□□ -0.17
VRK3-221ENST00000600284 YTHDF3Q7Z739 585 aaKnown RBP14□□□□□ -0.17
VRK3-221ENST00000600284 P2RY8Q86VZ1 359 aa14□□□□□ -0.17
VRK3-221ENST00000600284 ZNF100Q8IYN0 542 aa14□□□□□ -0.17
VRK3-221ENST00000600284 PIGXQ8TBF5 258 aa14□□□□□ -0.17
VRK3-221ENST00000600284 WDR60Q8WVS4 1066 aa14□□□□□ -0.17
VRK3-221ENST00000600284 CNOT9Q92600 299 aaKnown RBP14□□□□□ -0.17
VRK3-221ENST00000600284 ZNF300Q96RE9 604 aaPredicted RBP14□□□□□ -0.17
VRK3-221ENST00000600284 RMND5AQ9H871 391 aa14□□□□□ -0.17
VRK3-221ENST00000600284 SDR39U1Q9NRG7 319 aaPredicted RBP14□□□□□ -0.17
VRK3-221ENST00000600284 ZNF701Q9NV72 531 aaPredicted RBP14□□□□□ -0.17
VRK3-221ENST00000600284 THUMPD1Q9NXG2 353 aaKnown RBP14□□□□□ -0.17
VRK3-221ENST00000600284 CALML5Q9NZT1 146 aa14□□□□□ -0.17
VRK3-221ENST00000600284 DSCAMO60469 2012 aa14□□□□□ -0.17
VRK3-221ENST00000600284 ARID1AO14497 2285 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 UBDO15205 165 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 EIF1BO60739 113 aaKnown RBP13.99□□□□□ -0.17
VRK3-221ENST00000600284 ADAM11O75078 769 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 GSNP06396 782 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 CD3EP07766 207 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 UQCRBP14927 111 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 HOXB4P17483 251 aaPredicted RBP13.99□□□□□ -0.17
VRK3-221ENST00000600284 COX5AP20674 150 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 SLC1A3P43003 542 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 PTH2RP49190 550 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 POLR2HP52434 150 aaKnown RBP13.99□□□□□ -0.17
VRK3-221ENST00000600284 SLC16A1P53985 500 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 TSC22D1Q15714 1073 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 ZSWIM7Q19AV6 140 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 SLC9B1Q4ZJI4 515 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 COX20Q5RI15 118 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 PEX5LQ8IYB4 626 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 ZNF440Q8IYI8 595 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 AKAP1Q92667 903 aaKnown RBP eCLIP13.99□□□□□ -0.17
VRK3-221ENST00000600284 DDIT4LQ96D03 193 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 PERPQ96FX8 193 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 ARL5BQ96KC2 179 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 TMEM181Q9P2C4 612 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 P2RX2Q9UBL9 471 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 PRSS50Q9UI38 385 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 RNF115Q9Y4L5 304 aa13.99□□□□□ -0.17
VRK3-221ENST00000600284 FREM1Q5H8C1 2179 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 TMED7-TICAM2A0A0A6YYA0 188 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 CFAP73A6NFT4 308 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 ZNF716A6NP11 495 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 PGM3O95394 542 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 ANP32DO95626 131 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 MVDP53602 400 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 H3F3AP84243 136 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 EPS8Q12929 822 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 CAPRIN1Q14444 709 aaKnown RBP13.98□□□□□ -0.17
VRK3-221ENST00000600284 TIMM23BQ5SRD1 257 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 MRPL2Q5T653 305 aaKnown RBP13.98□□□□□ -0.17
VRK3-221ENST00000600284 FBXW9Q5XUX1 488 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 DNAJC14Q6Y2X3 702 aaPredicted RBP13.98□□□□□ -0.17
VRK3-221ENST00000600284 ZNF775Q96BV0 537 aaPredicted RBP13.98□□□□□ -0.17
VRK3-221ENST00000600284 MUCL1Q96DR8 90 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 ITCHQ96J02 903 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 COX4I2Q96KJ9 171 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 Q96MF0 132 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 ADAM19Q9H013 955 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 OSGIN1Q9UJX0 560 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 NOSIPQ9Y314 301 aaKnown RBP13.98□□□□□ -0.17
VRK3-221ENST00000600284 TMED7Q9Y3B3 224 aa13.98□□□□□ -0.17
VRK3-221ENST00000600284 ROS1P08922 2347 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 DSPPQ9NZW4 1301 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 LYZL6O75951 148 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 GGT1P19440 569 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 IGHV1-2P23083 117 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 TACR3P29371 465 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 CRATP43155 626 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 POLR2JP52435 117 aaKnown RBP13.97□□□□□ -0.17
VRK3-221ENST00000600284 CRISP3P54108 245 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 SLC35A1P78382 337 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 PPA1Q15181 289 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 MAPK11Q15759 364 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms