RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 C1QTNF12Q5T7M4 302 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 TSPO2Q5TGU0 170 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 LIPMQ5VYY2 423 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 KANK2Q63ZY3 851 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 OR7E24Q6IFN5 339 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 C3orf33Q6P1S2 294 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 KLHL17Q6TDP4 642 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 SZRD1Q7Z422 152 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 R3HCC1LQ7Z5L2 792 aaKnown RBP5.33□□□□□ -1.56
VRK3-220ENST00000600259 MEX3DQ86XN8 651 aaKnown RBP5.33□□□□□ -1.56
VRK3-220ENST00000600259 DEPDC4Q8N2C3 294 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 RFLNBQ8N5W9 214 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 C1orf162Q8NEQ5 155 aaPredicted RBP5.33□□□□□ -1.56
VRK3-220ENST00000600259 OR5D16Q8NGK9 328 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 ADAMTS15Q8TE58 950 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 JADE3Q92613 823 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 APH1AQ96BI3 265 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 C3orf30Q96M34 536 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 PLA2G12AQ9BZM1 189 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 SAP130Q9H0E3 1048 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CHODLQ9H9P2 273 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CTPS2Q9NRF8 586 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 GIMAP2Q9UG22 337 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 DCTN4Q9UJW0 460 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 POU2F3Q9UKI9 436 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 MOKQ9UQ07 419 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 TRAPPC4Q9Y296 219 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 TMED5Q9Y3A6 229 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 HDGFL3Q9Y3E1 203 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 TRAF6Q9Y4K3 522 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 FLVCR1Q9Y5Y0 555 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 ATP23Q9Y6H3 246 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 HEATR1Q9H583 2144 aaKnown RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 IGHV1-18A0A0C4DH31 117 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 LRP5LA4QPB2 252 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 TMEM233B4DJY2 109 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 ATP6V1G2-DDX39BF2Z307 99 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 SCN2BO60939 215 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 GLRA3O75311 464 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 MRPL33O75394 65 aaKnown RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 SLU7O95391 586 aaKnown RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 STAMBPO95630 424 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 CSTAP01040 98 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 TACSTD2P09758 323 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 FAM153BP0C7A2 387 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 UBTFL6P0CB48 400 aaPredicted RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 NEFHP12036 1026 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 APEHP13798 732 aaKnown RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 EGR1P18146 543 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 PGCP20142 388 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 GIFP27352 417 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 CFPP27918 469 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 IL2RGP31785 369 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 ARRB2P32121 409 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 APOBEC1P41238 236 aaKnown RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 HBA1P69905 142 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 HGFACQ04756 655 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 CKAP4Q07065 602 aaKnown RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 TP53BP2Q13625 1128 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 PTGR1Q14914 329 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 GPR68Q15743 365 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 ADIPOQQ15848 244 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 ARHGAP11BQ3KRB8 267 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 CCDC153Q494R4 210 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 FAM153CQ494X1 144 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 XKR7Q5GH72 579 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 C6orf136Q5SQH8 315 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 C9orf135Q5VTT2 229 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 LIPNQ5VXI9 398 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 TRMT10CQ7L0Y3 403 aaKnown RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 C6orf120Q7Z4R8 191 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 C10orf107Q8IVU9 208 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 UBE2J2Q8N2K1 259 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 C17orf78Q8N4C9 275 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 KRTCAP2Q8N6L1 136 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 ANKS4BQ8N8V4 417 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 OR56A1Q8NGH5 318 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 MIPOL1Q8TD10 442 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 SFXN5Q8TD22 340 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 SLC25A43Q8WUT9 341 aaPredicted RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 TMEM234Q8WY98 164 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 FBXO17Q96EF6 278 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 DNAJA3Q96EY1 480 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 DOK1Q99704 481 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 OR11A1Q9GZK7 315 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 BPESC1Q9GZL8 116 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 ZNF350Q9GZX5 532 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 PLK3Q9H4B4 646 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 FKRPQ9H9S5 495 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 SERINC1Q9NRX5 453 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 EMC3Q9P0I2 261 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 PSMC3IPQ9P2W1 217 aaPredicted RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 CHRNA9Q9UGM1 479 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 MKLN1Q9UL63 735 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 FAF1Q9UNN5 650 aaPredicted RBP5.32□□□□□ -1.56
VRK3-220ENST00000600259 AMDHD2Q9Y303 409 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.32□□□□□ -1.56
VRK3-220ENST00000600259 TGP01266 2768 aa5.32□□□□□ -1.56
VRK3-220ENST00000600259 ZC3H12DA2A288 527 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 CLDN24A6NM45 220 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms