RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 RNF113BQ8IZP6 322 aaKnown RBP10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 OR2M7Q8NG81 312 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 OR4K5Q8NGD3 323 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 OR9Q2Q8NGE9 314 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 TMEM239Q8WW34 195 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 C1GALT1C1Q96EU7 318 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 JSRP1Q96MG2 331 aaPredicted RBP10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 FAM173AQ9BQD7 235 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 HES7Q9BYE0 225 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 VCXQ9H320 206 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 MED17Q9NVC6 651 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 TUBA8Q9NY65 449 aaPredicted RBP10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 MGAT4BQ9UQ53 548 aa10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 PCDHGA9Q9Y5G4 932 aaKnown RBP10.4□□□□□ -0.74
SH2D3A-206ENST00000597254 LRRK2Q5S007 2527 aa10.4□□□□□ -0.75
SH2D3A-206ENST00000597254 BSNQ9UPA5 3926 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 NAV2Q8IVL1 2488 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 A0A0G2JMM0 328 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 A0A1W2PPB8 328 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 A0A1W2PRS3 328 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ELOA3DA6NLF2 546 aaPredicted RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 TTLL8A6PVC2 850 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 KIR3DP1A8MWS1 328 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 FAM47E-STBD1D6RA91 191 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 H0YJX3 145 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 HPRP00739 348 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ALPLP05186 524 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 PNMTP11086 282 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 PRKCAP17252 672 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 CBLP22681 906 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 CXCR1P25024 350 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 RBM34P42696 430 aaKnown RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 POLR2HP52434 150 aaKnown RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 UGT2B15P54855 530 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 AQP4P55087 323 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 MLLT10P55197 1068 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 DSCR4P56555 118 aaPredicted RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 PRKCDQ05655 676 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ELOA3BQ3SY89 546 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 SLC25A53Q5H9E4 307 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 KDM4DQ6B0I6 523 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 C1orf94Q6P1W5 598 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 PGBD2Q6P3X8 592 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 IZUMO2Q6UXV1 221 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 GRINAQ7Z429 371 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 GALNTL5Q7Z4T8 443 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ZER1Q7Z7L7 766 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 LSRQ86X29 649 aaPredicted RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 AQP11Q8NBQ7 271 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ELOA3Q8NG57 546 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 GNPDA2Q8TDQ7 276 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ST8SIA1Q92185 356 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 SCMH1Q96GD3 660 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ZNF597Q96LX8 424 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 NPAS1Q99742 590 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 NIPSNAP1Q9BPW8 284 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 ZNF426Q9BUY5 554 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 KLHL1Q9NR64 748 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 TMEFF2Q9UIK5 374 aaPredicted RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 OSGIN1Q9UJX0 560 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 VDAC3Q9Y277 283 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 KLF13Q9Y2Y9 288 aaPredicted RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 MED31Q9Y3C7 131 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 PCDHGB6Q9Y5F9 930 aa10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 TNRC6AQ8NDV7 1962 aaKnown RBP10.39□□□□□ -0.75
SH2D3A-206ENST00000597254 FLNCQ14315 2725 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 A0A087WZY1 265 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 TMED7-TICAM2A0A0A6YYA0 188 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 LRRC3CA6NJW4 275 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 KLRC4-KLRK1H3BQV0 150 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 DLGAP1O14490 977 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 PIP5K1CO60331 668 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 NME2P1O60361 137 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 MITFO75030 526 aaPredicted RBP10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 PDGFAP04085 211 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 POU2F1P14859 743 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 HK1P19367 917 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 CCNA2P20248 432 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 PTNP21246 168 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 NME2P22392 152 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 DPP4P27487 766 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 IFNGR2P38484 337 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 APOBEC1P41238 236 aaKnown RBP10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 HTR3AP46098 478 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 OMPP47874 163 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 TNFSF10P50591 281 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 ZNF41P51814 821 aaPredicted RBP10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 IL1RL1Q01638 556 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 FOXO1Q12778 655 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 MERTKQ12866 999 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 PLPPR5Q32ZL2 321 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 ZNF766Q5HY98 468 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 IGFL3Q6UXB1 125 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 NRMQ8IXM6 262 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 PFN4Q8NHR9 129 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 PIGXQ8TBF5 258 aa10.38□□□□□ -0.75
SH2D3A-206ENST00000597254 POC1BQ8TC44 478 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms