RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 FAM27E3Q08E93 113 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 NFYCQ13952 458 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 SCARB2Q14108 478 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 SELPLGQ14242 412 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 SLC43A2Q8N370 569 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 LINC01560Q8TB33 94 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 ABHD3Q8WU67 409 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 SLC35B4Q969S0 331 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 ARL5BQ96KC2 179 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 ARMC7Q9H6L4 198 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 CACYBPQ9HB71 228 aaKnown RBP18.81■□□□□ 0.6
PNKP-209ENST00000596726 ELOVL5Q9NYP7 299 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 TMED7Q9Y3B3 224 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 HDGFL3Q9Y3E1 203 aa18.81■□□□□ 0.6
PNKP-209ENST00000596726 ZNF208O43345 1280 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 PRKD3O94806 890 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 EPXP11678 715 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 PRG2P13727 222 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 SLC6A2P23975 617 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 TACR3P29371 465 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 CPOXP36551 454 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 CD79BP40259 229 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 MAP2K6P52564 334 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 MTPNP58546 118 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 DAZAP2Q15038 168 aaPredicted RBP18.8■□□□□ 0.6
PNKP-209ENST00000596726 COQ5Q5HYK3 327 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 PTOV1Q86YD1 416 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 OR11A1Q9GZK7 315 aa18.8■□□□□ 0.6
PNKP-209ENST00000596726 ING1Q9UK53 422 aaPredicted RBP18.8■□□□□ 0.6
PNKP-209ENST00000596726 CSMD2Q7Z408 3487 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 IGHV3-15A0A0B4J1V0 119 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 TMEM72A0PK05 275 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 SULT2B1O00204 365 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 SMAD9O15198 467 aaKnown RBP18.79■□□□□ 0.6
PNKP-209ENST00000596726 CYTIPO60759 359 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 PMS2P2O95744 297 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 TFPIP10646 304 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 KLK2P20151 261 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 PRKAR1BP31321 381 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 CSNK2A1P68400 391 aaPredicted RBP18.79■□□□□ 0.6
PNKP-209ENST00000596726 TRMT5Q32P41 509 aaKnown RBP18.79■□□□□ 0.6
PNKP-209ENST00000596726 WBP2NLQ6ICG8 309 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 DHRS4L2Q6PKH6 230 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 NET1Q7Z628 596 aaPredicted RBP18.79■□□□□ 0.6
PNKP-209ENST00000596726 SERPINA11Q86U17 422 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 HIPK4Q8NE63 616 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 DACH2Q96NX9 599 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 SLC39A3Q9BRY0 314 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 SPATA5L1Q9BVQ7 753 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 KAT8Q9H7Z6 458 aaKnown RBP18.79■□□□□ 0.6
PNKP-209ENST00000596726 BCO1Q9HAY6 547 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 KLHL13Q9P2N7 655 aa18.79■□□□□ 0.6
PNKP-209ENST00000596726 POLQO75417 2590 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 CREBBPQ92793 2442 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 CTAG2O75638 210 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 CCNA2P20248 432 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 RBBP4Q09028 425 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 CAPRIN1Q14444 709 aaKnown RBP18.78■□□□□ 0.6
PNKP-209ENST00000596726 MAPRE2Q15555 327 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 MTDHQ86UE4 582 aaKnown RBP18.78■□□□□ 0.6
PNKP-209ENST00000596726 KRT73Q86Y46 540 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 TUSC5Q8IXB3 177 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 PSD2Q9BQI7 771 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 TACO1Q9BSH4 297 aaKnown RBP18.78■□□□□ 0.6
PNKP-209ENST00000596726 TRAPPC4Q9Y296 219 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 CSMD1Q96PZ7 3565 aa18.78■□□□□ 0.6
PNKP-209ENST00000596726 HRNRQ86YZ3 2850 aaPredicted RBP18.78■□□□□ 0.6
PNKP-209ENST00000596726 A6NNC1 897 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 BBIP1A8MTZ0 92 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 FXYD1O00168 92 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 SLC22A2O15244 555 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 FRS3O43559 492 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 DNPH1O43598 174 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 TPST1O60507 370 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 NPPAP01160 153 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 FESP07332 822 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 YES1P07947 543 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 POU2F1P14859 743 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 CCKARP32238 428 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 GZMMP51124 257 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 PCBP3P57721 371 aaKnown RBP18.77■□□□□ 0.6
PNKP-209ENST00000596726 COPZ1P61923 177 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 CYLC2Q14093 348 aaPredicted RBP18.77■□□□□ 0.6
PNKP-209ENST00000596726 TMEM201Q5SNT2 666 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 REP15Q6BDI9 236 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 NANOGP8Q6NSW7 305 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 NUFIP2Q7Z417 695 aaKnown RBP18.77■□□□□ 0.6
PNKP-209ENST00000596726 COMTD1Q86VU5 262 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 LSRQ86X29 649 aaPredicted RBP18.77■□□□□ 0.6
PNKP-209ENST00000596726 C11orf65Q8NCR3 313 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 LRRC58Q96CX6 371 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 DDIT4LQ96D03 193 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 ZNF607Q96SK3 696 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 NANOGQ9H9S0 305 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 TMEM181Q9P2C4 612 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 KLHL9Q9P2J3 617 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 ABCA4P78363 2273 aa18.77■□□□□ 0.6
PNKP-209ENST00000596726 ZC3H12DA2A288 527 aaKnown RBP18.76■□□□□ 0.59
PNKP-209ENST00000596726 SH3D21A4FU49 640 aa18.76■□□□□ 0.59
PNKP-209ENST00000596726 GCM2O75603 506 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms