RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ZNF724A8MTY0 619 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 SULT2B1O00204 365 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 FAAHO00519 579 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 KRT75O95678 551 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 PMS2P2O95744 297 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 ADAP00813 363 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 DBIP07108 87 aaKnown RBP11.56□□□□□ -0.56
LIG1-212ENST00000596549 NUDT7P0C024 238 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 TFPTP0C1Z6 253 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 NR2F1P10589 423 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 IMPDH2P12268 514 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 IL7RP16871 459 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 COX5AP20674 150 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 DSTNP60981 165 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 CSNK2A1P68400 391 aaPredicted RBP11.56□□□□□ -0.56
LIG1-212ENST00000596549 EPS8Q12929 822 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 TAB1Q15750 504 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 ZNF704Q6ZNC4 412 aaPredicted RBP11.56□□□□□ -0.56
LIG1-212ENST00000596549 Q6ZT83 130 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 FUNDC1Q8IVP5 155 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 C10orf111Q8N326 155 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 MIER2Q8N344 545 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 ZNF775Q96BV0 537 aaPredicted RBP11.56□□□□□ -0.56
LIG1-212ENST00000596549 TMEM19Q96HH6 336 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 ITCHQ96J02 903 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 CCL19Q99731 98 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 PIP5K1AQ99755 562 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 FANCFQ9NPI8 374 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 TCF7L2Q9NQB0 619 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 RLIMQ9NVW2 624 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 OSGIN1Q9UJX0 560 aa11.56□□□□□ -0.56
LIG1-212ENST00000596549 ZNF443Q9Y2A4 671 aaPredicted RBP11.56□□□□□ -0.56
LIG1-212ENST00000596549 SPIN1Q9Y657 262 aaPredicted RBP11.56□□□□□ -0.56
LIG1-212ENST00000596549 TMED7-TICAM2A0A0A6YYA0 188 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 FAM234BA2RU67 622 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 CDHR4A6H8M9 788 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 POLR3GO15318 223 aaPredicted RBP11.55□□□□□ -0.56
LIG1-212ENST00000596549 LYZL6O75951 148 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 ANP32DO95626 131 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 GKN3PP0CG01 181 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 TFPIP10646 304 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 CCNA2P20248 432 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 IGHV1-2P23083 117 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 TACR3P29371 465 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 NTF4P34130 210 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 CRATP43155 626 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 MAGEA8P43361 318 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 IDH3AP50213 366 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 CRISP3P54108 245 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 NKX6-1P78426 367 aaPredicted RBP11.55□□□□□ -0.56
LIG1-212ENST00000596549 LIN52Q52LA3 116 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 Q5PR19 223 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 C6orf10Q5SRN2 563 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 RNF220Q5VTB9 566 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 C20orf204Q6ZNR8 217 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 MTDHQ86UE4 582 aaKnown RBP11.55□□□□□ -0.56
LIG1-212ENST00000596549 MSRB3Q8IXL7 192 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 LRRC75A-AS1Q8N1F1 130 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 STEAP2Q8NFT2 490 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 OR52P1PQ8NH57 321 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 LRRC8CQ8TDW0 803 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 SLC38A5Q8WUX1 472 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 KISS1RQ969F8 398 aaPredicted RBP11.55□□□□□ -0.56
LIG1-212ENST00000596549 RSPO3Q9BXY4 272 aaPredicted RBP11.55□□□□□ -0.56
LIG1-212ENST00000596549 POTEKPQ9BYX7 375 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
LIG1-212ENST00000596549 RMND5AQ9H871 391 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 MTHFD2LQ9H903 347 aaPredicted RBP11.55□□□□□ -0.56
LIG1-212ENST00000596549 SLC52A3Q9NQ40 469 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 SLC25A37Q9NYZ2 338 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 TMED7Q9Y3B3 224 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 HDGFL3Q9Y3E1 203 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 PCDHB14Q9Y5E9 798 aa11.55□□□□□ -0.56
LIG1-212ENST00000596549 NF1P21359 2839 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 CFAP73A6NFT4 308 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 ZNF208O43345 1280 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 DNPH1O43598 174 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 BMP2P12643 396 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 PRG2P13727 222 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 FPR1P21462 350 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 IL32P24001 234 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 ACAA2P42765 397 aaKnown RBP11.54□□□□□ -0.56
LIG1-212ENST00000596549 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
LIG1-212ENST00000596549 SLC16A1P53985 500 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 NR1H2P55055 460 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 H3F3AP84243 136 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 ITGADQ13349 1161 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 PDK3Q15120 406 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 LRIF1Q5T3J3 769 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 BHLHA15Q7RTS1 189 aaPredicted RBP11.54□□□□□ -0.56
LIG1-212ENST00000596549 CCDC103Q8IW40 242 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 PEX5LQ8IYB4 626 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 LILRB1Q8NHL6 650 aaPredicted RBP11.54□□□□□ -0.56
LIG1-212ENST00000596549 MAL2Q969L2 176 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 SLAMF8Q9P0V8 285 aa11.54□□□□□ -0.56
LIG1-212ENST00000596549 TRBV5-3A0A0A0MS03 114 aa11.53□□□□□ -0.56
LIG1-212ENST00000596549 NR5A2O00482 541 aa11.53□□□□□ -0.56
LIG1-212ENST00000596549 HS3ST1O14792 307 aa11.53□□□□□ -0.56
LIG1-212ENST00000596549 SMPD2O60906 423 aa11.53□□□□□ -0.56
LIG1-212ENST00000596549 TGDSO95455 350 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms