RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 A0A1W2PS29 197 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 HNRNPCL3B7ZW38 293 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 TNFRSF11BO00300 401 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 CYR61O00622 381 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 PHF1O43189 567 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-202ENST00000595242 SERPINB7O75635 380 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 EPPINO95925 133 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 AGR2O95994 175 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 IL2RAP01589 272 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 IFNW1P05000 195 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 HMGN2P05204 90 aaKnown RBP11.62□□□□□ -0.55
SCAF1-202ENST00000595242 FESP07332 822 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 HNRNPCL4P0DMR1 293 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 ANXA8P13928 327 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 CPMP14384 443 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 TIMP3P35625 211 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 FEN1P39748 380 aaKnown RBP11.62□□□□□ -0.55
SCAF1-202ENST00000595242 MC3RP41968 323 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF136P52737 540 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 RAB38P57729 211 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 ISL1P61371 349 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 TOP3AQ13472 1001 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-202ENST00000595242 DUSP7Q16829 419 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 HEPHL1Q6MZM0 1159 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 TMEM107Q6UX40 140 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 SATL1Q86VE3 508 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 KRT73Q86Y46 540 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 CA13Q8N1Q1 262 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 OR2L13Q8N349 312 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 SETD9Q8NE22 299 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 NUP43Q8NFH3 380 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 OR9A2Q8NGT5 310 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF675Q8TD23 568 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 GIPC3Q8TF64 312 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 VMP1Q96GC9 406 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 MS4A4EQ96PG1 132 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 CSF3RQ99062 836 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 MYCBPQ99417 103 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-202ENST00000595242 CCL19Q99731 98 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 SPATA5L1Q9BVQ7 753 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 RSPO3Q9BXY4 272 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-202ENST00000595242 NECTIN3Q9NQS3 549 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 CALML5Q9NZT1 146 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 NDRG4Q9ULP0 352 aaKnown RBP11.62□□□□□ -0.55
SCAF1-202ENST00000595242 LIPT1Q9Y234 373 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 IGKV3D-11A0A0A0MRZ8 115 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 KDM4EB2RXH2 506 aaPredicted RBP11.61□□□□□ -0.55
SCAF1-202ENST00000595242 EEF1E1-BLOC1S5C9J1V9 151 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 EEF1E1O43324 174 aaKnown RBP11.61□□□□□ -0.55
SCAF1-202ENST00000595242 PRKNO60260 465 aaPredicted RBP11.61□□□□□ -0.55
SCAF1-202ENST00000595242 MITFO75030 526 aaPredicted RBP11.61□□□□□ -0.55
SCAF1-202ENST00000595242 ATP1B1P05026 303 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 CHRM4P08173 479 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 NID1P14543 1247 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 ATP6V1B1P15313 513 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 TNFRSF1BP20333 461 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 SOX18P35713 384 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 SOX3P41225 446 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 DNASE1L1P49184 302 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 AGFG1P52594 562 aaKnown RBP11.61□□□□□ -0.55
SCAF1-202ENST00000595242 SPIBQ01892 262 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 CD47Q08722 323 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 FOXO1Q12778 655 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 LASP1Q14847 261 aaKnown RBP11.61□□□□□ -0.55
SCAF1-202ENST00000595242 SYPL1Q16563 259 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 MICAQ29983 383 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF628Q5EBL2 1059 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 MFSD12Q6NUT3 480 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 CDC73Q6P1J9 531 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 OR5D16Q8NGK9 328 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 PROX1Q92786 737 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 TANKQ92844 425 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 OR7D2Q96RA2 312 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 ACTRT3Q9BYD9 372 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 ACER3Q9NUN7 267 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 GIN1Q9NXP7 522 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 TESMINQ9Y4I5 508 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 NPFFR2Q9Y5X5 522 aa11.61□□□□□ -0.55
SCAF1-202ENST00000595242 SH3D21A4FU49 640 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 DUXAA6NLW8 204 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 AHRRA9YTQ3 701 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 CASKO14936 926 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 ZFAND5O76080 213 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 CCDC159P0C7I6 412 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 NR2F1P10589 423 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 PORP16435 677 aaPredicted RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 CRHBPP24387 322 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 OR1E2P47887 323 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 CLK3P49761 638 aaKnown RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 XKP51811 444 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 CXCR4P61073 352 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 LTB4RQ15722 352 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 ACSF3Q4G176 576 aaPredicted RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 C6orf141Q5SZD1 244 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 LAIR2Q6ISS4 152 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF773Q6PK81 442 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 RTL4Q6ZR62 310 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms