RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 DOCK9Q9BZ29 2069 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 TICRRQ7Z2Z1 1910 aa12.23□□□□□ -0.45
VRK3-209ENST00000594948 NUP210LQ5VU65 1888 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 SCN3AQ9NY46 2000 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 PCDH8O95206 1070 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 PPP1R3DO95685 299 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 ZNF888P0CJ79 500 aaPredicted RBP12.22□□□□□ -0.45
VRK3-209ENST00000594948 CPMP14384 443 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
VRK3-209ENST00000594948 DRD5P21918 477 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 MAT2AP31153 395 aaKnown RBP12.22□□□□□ -0.45
VRK3-209ENST00000594948 MAP3K8P41279 467 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 MECP2P51608 486 aaKnown RBP12.22□□□□□ -0.45
VRK3-209ENST00000594948 RPS11P62280 158 aaKnown RBP eCLIP12.22□□□□□ -0.45
VRK3-209ENST00000594948 SIRPAP78324 504 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 RPTNQ6XPR3 784 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 NUDT18Q6ZVK8 323 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 SSX6Q7RTT6 188 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 UBE2Q1Q7Z7E8 422 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 BMPERQ8N8U9 685 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 C15orf40Q8WUR7 153 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 TM4SF19Q96DZ7 209 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 PELI1Q96FA3 418 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 PEX11GQ96HA9 241 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 MYADMQ96S97 322 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 C1QTNF7Q9BXJ2 289 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 TMPRSS13Q9BYE2 586 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 HRASLSQ9HDD0 168 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 MEPEQ9NQ76 525 aaPredicted RBP12.22□□□□□ -0.45
VRK3-209ENST00000594948 OR6C2Q9NZP2 312 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 OR1A2Q9Y585 309 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 COLEC10Q9Y6Z7 277 aa12.22□□□□□ -0.45
VRK3-209ENST00000594948 A0A0B4J2E0 115 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 A0A1B0GX12 115 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 M0R233 179 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 HPXP02790 462 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 CEACAM5P06731 702 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 SLC35G6P0C7Q6 338 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 GKN3PP0CG01 181 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 ENPP1P22413 925 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 PRKACBP22694 351 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 BLVRAP53004 296 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 TMEM65Q6PI78 240 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 GPAT4Q86UL3 456 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 GRAMD2AQ8IUY3 354 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 CMTM4Q8IZR5 234 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 SIX5Q8N196 739 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 FTMTQ8N4E7 242 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 COX18Q8N8Q8 333 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 KCT2Q8NC54 265 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 OR11G2Q8NGC1 345 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 OR6C4Q8NGE1 309 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 OR13C5Q8NGS8 318 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 OR2T35Q8NGX2 323 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 OR2T4Q8NH00 348 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 ZNF671Q8TAW3 534 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 LGALS14Q8TCE9 139 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 MS4A3Q96HJ5 214 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 CNN2Q99439 309 aaKnown RBP12.21□□□□□ -0.45
VRK3-209ENST00000594948 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 KCNE5Q9UJ90 142 aa12.21□□□□□ -0.45
VRK3-209ENST00000594948 MRPS7Q9Y2R9 242 aaKnown RBP12.21□□□□□ -0.45
VRK3-209ENST00000594948 HTTP42858 3142 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 URADA6NGE7 173 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 OR6C65A6NJZ3 312 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 B3GALT2O43825 422 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 BRINP1O60477 761 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 KRT33AO76009 404 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 TFP02787 698 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 IFNA16P05015 189 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 IL5P05113 134 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 GIPP09681 153 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 CLUP10909 449 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 UBL4AP11441 157 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 IFNGR1P15260 489 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 EPCAMP16422 314 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 ZNF10P21506 573 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 MNX1P50219 401 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 LGALS3BPQ08380 585 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 TP53I3Q53FA7 332 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 RNASE12Q5GAN4 147 aaKnown RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 SLC35D3Q5M8T2 416 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 FAM199XQ6PEV8 388 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 BPHLQ86WA6 291 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 SLC35F2Q8IXU6 374 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 HOXB13Q92826 284 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 COL26A1Q96A83 441 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 DACT3Q96B18 629 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 CLIP3Q96DZ5 547 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 METTL17Q9H7H0 456 aaPredicted RBP12.21□□□□□ -0.46
VRK3-209ENST00000594948 MCCC2Q9HCC0 563 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 LYRM4Q9HD34 91 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 CHRNA9Q9UGM1 479 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 DAPP1Q9UN19 280 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 SLC22A7Q9Y694 548 aa12.21□□□□□ -0.46
VRK3-209ENST00000594948 TRAV27A0A087WT01 109 aa12.2□□□□□ -0.46
VRK3-209ENST00000594948 OR52A4PA6NMU1 304 aa12.2□□□□□ -0.46
VRK3-209ENST00000594948 SNRPGP15A8MWD9 76 aa12.2□□□□□ -0.46
VRK3-209ENST00000594948 AIPO00170 330 aa12.2□□□□□ -0.46
VRK3-209ENST00000594948 MID1O15344 667 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms