RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CYTIPO60759 359 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 CYP7B1O75881 506 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 CD8AP01732 235 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 C1QCP02747 245 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 COX5AP20674 150 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 PTNP21246 168 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 FUT5Q11128 374 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 TIGD2Q4W5G0 525 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 TTMPQ5BVD1 217 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 TIMM23BQ5SRD1 257 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 ANXA8L1Q5VT79 327 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 SAXO2Q658L1 398 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 ATG16L1Q676U5 607 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 BHLHB9Q6PI77 547 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 CLEC2AQ6UVW9 174 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 DNAJC14Q6Y2X3 702 aaPredicted RBP13.02□□□□□ -0.33
PNKP-202ENST00000593706 DNM1P46Q6ZS02 220 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 C6orf120Q7Z4R8 191 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 DTX2Q86UW9 622 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 PHC2Q8IXK0 858 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 OR4A15Q8NGL6 344 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 OR5W2Q8NH69 310 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 ZNF524Q96C55 264 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 SDF2Q99470 211 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 CACNG6Q9BXT2 260 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 NMUR2Q9GZQ4 415 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 SERINC1Q9NRX5 453 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 NPAP1Q9NZP6 1156 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 EMC3Q9P0I2 261 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 KCNE5Q9UJ90 142 aa13.02□□□□□ -0.33
PNKP-202ENST00000593706 ANK2Q01484 3957 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 IGHV4-30-2A0A087WSY4 118 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 OR5H1A6NKK0 313 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 SLCO1B7G3V0H7 640 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 EIF4E2O60573 245 aaKnown RBP13.01□□□□□ -0.33
PNKP-202ENST00000593706 RAD51DO75771 328 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 H6PDO95479 791 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 THBS1P07996 1170 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 GUSBP08236 651 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
PNKP-202ENST00000593706 IGHV1-2P23083 117 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 GPR68Q15743 365 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 SLC9B1Q4ZJI4 515 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 SLC25A53Q5H9E4 307 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 C6orf52Q5T4I8 152 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 SLC22A25Q6T423 547 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 TMEM108Q6UXF1 575 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 GALNT5Q7Z7M9 940 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 UBE2J2Q8N2K1 259 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 ZNF75CPQ92670 426 aaPredicted RBP13.01□□□□□ -0.33
PNKP-202ENST00000593706 NEURL3Q96EH8 262 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 RADILQ96JH8 1075 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 GRIP2Q9C0E4 1043 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 QRSL1Q9H0R6 528 aaKnown RBP13.01□□□□□ -0.33
PNKP-202ENST00000593706 BTNL2Q9UIR0 455 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 ING1Q9UK53 422 aaPredicted RBP13.01□□□□□ -0.33
PNKP-202ENST00000593706 B3GALT5Q9Y2C3 310 aa13.01□□□□□ -0.33
PNKP-202ENST00000593706 CIB4A0PJX0 185 aa13□□□□□ -0.33
PNKP-202ENST00000593706 FAM234BA2RU67 622 aa13□□□□□ -0.33
PNKP-202ENST00000593706 PRAMEF27A3QJZ7 478 aa13□□□□□ -0.33
PNKP-202ENST00000593706 CCT8L1PA6NM43 557 aa13□□□□□ -0.33
PNKP-202ENST00000593706 ZNF724A8MTY0 619 aa13□□□□□ -0.33
PNKP-202ENST00000593706 SULT2B1O00204 365 aa13□□□□□ -0.33
PNKP-202ENST00000593706 ETV2O00321 342 aaPredicted RBP13□□□□□ -0.33
PNKP-202ENST00000593706 FCMRO60667 390 aa13□□□□□ -0.33
PNKP-202ENST00000593706 DNAJA2O60884 412 aa13□□□□□ -0.33
PNKP-202ENST00000593706 IGHV3-9P01782 118 aa13□□□□□ -0.33
PNKP-202ENST00000593706 PGRP06401 933 aa13□□□□□ -0.33
PNKP-202ENST00000593706 KITP10721 976 aa13□□□□□ -0.33
PNKP-202ENST00000593706 MATN1P21941 496 aa13□□□□□ -0.33
PNKP-202ENST00000593706 UQCRC2P22695 453 aa13□□□□□ -0.33
PNKP-202ENST00000593706 EDNRAP25101 427 aa13□□□□□ -0.33
PNKP-202ENST00000593706 S100A3P33764 101 aa13□□□□□ -0.33
PNKP-202ENST00000593706 DIO1P49895 249 aa13□□□□□ -0.33
PNKP-202ENST00000593706 NME5P56597 212 aa13□□□□□ -0.33
PNKP-202ENST00000593706 CSNK2A1P68400 391 aaPredicted RBP13□□□□□ -0.33
PNKP-202ENST00000593706 MERTKQ12866 999 aa13□□□□□ -0.33
PNKP-202ENST00000593706 SKP2Q13309 424 aa13□□□□□ -0.33
PNKP-202ENST00000593706 ZNF141Q15928 474 aa13□□□□□ -0.33
PNKP-202ENST00000593706 ARHGAP11BQ3KRB8 267 aa13□□□□□ -0.33
PNKP-202ENST00000593706 KLHL17Q6TDP4 642 aa13□□□□□ -0.33
PNKP-202ENST00000593706 FBXL14Q8N1E6 418 aa13□□□□□ -0.33
PNKP-202ENST00000593706 OR52N5Q8NH56 324 aa13□□□□□ -0.33
PNKP-202ENST00000593706 NANOS1Q8WY41 292 aaKnown RBP13□□□□□ -0.33
PNKP-202ENST00000593706 TMEM234Q8WY98 164 aa13□□□□□ -0.33
PNKP-202ENST00000593706 ST8SIA1Q92185 356 aa13□□□□□ -0.33
PNKP-202ENST00000593706 SLC35G5Q96KT7 338 aa13□□□□□ -0.33
PNKP-202ENST00000593706 C7orf26Q96N11 449 aa13□□□□□ -0.33
PNKP-202ENST00000593706 OR52B2Q96RD2 323 aa13□□□□□ -0.33
PNKP-202ENST00000593706 THUMPD3Q9BV44 507 aaKnown RBP13□□□□□ -0.33
PNKP-202ENST00000593706 OR51I1Q9H343 314 aa13□□□□□ -0.33
PNKP-202ENST00000593706 SDR39U1Q9NRG7 319 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms