RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 FAM26EQ8N5C1 309 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 SIRT6Q8N6T7 355 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 ZNF563Q8TA94 476 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 C9orf43Q8TAL5 461 aaPredicted RBP12.25□□□□□ -0.45
VMP1-217ENST00000593168 RNF217Q8TC41 542 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 GPR119Q8TDV5 335 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 FRMD6Q96NE9 622 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 ANGPTL4Q9BY76 406 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 SLC19A3Q9BZV2 496 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 UBAP1Q9NZ09 502 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 STMN3Q9NZ72 180 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 CNIH4Q9P003 139 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 PPP4R1LQ9P1A2 415 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 REV1Q9UBZ9 1251 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 NDRG4Q9ULP0 352 aaKnown RBP12.25□□□□□ -0.45
VMP1-217ENST00000593168 TMEM5Q9Y2B1 443 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 MED31Q9Y3C7 131 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 PCDHGB6Q9Y5F9 930 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 WIF1Q9Y5W5 379 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 USP9XQ93008 2570 aaPredicted RBP12.25□□□□□ -0.45
VMP1-217ENST00000593168 DOCK10Q96BY6 2186 aa12.25□□□□□ -0.45
VMP1-217ENST00000593168 ANKUB1A6NFN9 424 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 KLF4O43474 513 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 CDC40O60508 579 aaKnown RBP eCLIP12.24□□□□□ -0.45
VMP1-217ENST00000593168 GNAO1P09471 354 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 PRKAR1AP10644 381 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 FPR3P25089 353 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 MST1P26927 711 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 HLCSP50747 726 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 CRISP1P54107 249 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 TMPRSS11FQ6ZWK6 438 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 ATG4DQ86TL0 474 aaPredicted RBP12.24□□□□□ -0.45
VMP1-217ENST00000593168 CDK20Q8IZL9 346 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 CLEC1AQ8NC01 280 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 TMEM234Q8WY98 164 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 ABHD17AQ96GS6 310 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 HRASLS5Q96KN8 279 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 PITX2Q99697 317 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 GPA33Q99795 319 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 GALNT9Q9HCQ5 603 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 HSPE1-MOB4S4R3N1 261 aa12.24□□□□□ -0.45
VMP1-217ENST00000593168 ELOA3DA6NLF2 546 aaPredicted RBP12.23□□□□□ -0.45
VMP1-217ENST00000593168 BCKDKO14874 412 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 NTN1O95631 604 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 CLIC3O95833 236 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 NUDT14O95848 222 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 IGF2P01344 180 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 TP53P04637 393 aaPredicted RBP12.23□□□□□ -0.45
VMP1-217ENST00000593168 ITGA3P26006 1051 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 EPHA2P29317 976 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 HTR3AP46098 478 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 CYB561P49447 251 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 CDC20Q12834 499 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 QPRTQ15274 297 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 ELOA3BQ3SY89 546 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 ZNF468Q5VIY5 522 aaPredicted RBP12.23□□□□□ -0.45
VMP1-217ENST00000593168 ABHD17BQ5VST6 288 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 ZNF691Q5VV52 312 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 BICRALQ6AI39 1079 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 KRT80Q6KB66 452 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 UGT2A3Q6UWM9 527 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 RASSF6Q6ZTQ3 369 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 GRINAQ7Z429 371 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 THAP5Q7Z6K1 395 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 C8orf59Q8N0T1 100 aaPredicted RBP12.23□□□□□ -0.45
VMP1-217ENST00000593168 SETD9Q8NE22 299 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 ELOA3Q8NG57 546 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 MIB2Q96AX9 1013 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 ZNF524Q96C55 264 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 FAM46AQ96IP4 442 aaKnown RBP12.23□□□□□ -0.45
VMP1-217ENST00000593168 MUS81Q96NY9 551 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 TMEM43Q9BTV4 400 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 MEPEQ9NQ76 525 aaPredicted RBP12.23□□□□□ -0.45
VMP1-217ENST00000593168 TAS2R10Q9NYW0 307 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 ABI3Q9P2A4 366 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 GMPPBQ9Y5P6 360 aa12.23□□□□□ -0.45
VMP1-217ENST00000593168 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
VMP1-217ENST00000593168 PIP5K1CO60331 668 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 SNX4O95219 450 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 RPSAP08865 295 aaKnown RBP12.22□□□□□ -0.45
VMP1-217ENST00000593168 CCL3P10147 92 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 IFI30P13284 250 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 CHMP24386 653 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 TACR3P29371 465 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 GGT2P36268 569 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 PTGES3Q15185 160 aaKnown RBP12.22□□□□□ -0.45
VMP1-217ENST00000593168 TOMM34Q15785 309 aaPredicted RBP12.22□□□□□ -0.45
VMP1-217ENST00000593168 DEFB109BQ30KR1 87 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 CYP4Z2PQ8N1L4 340 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 BEST3Q8N1M1 668 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 GALNT16Q8N428 558 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 CLDN22Q8N7P3 220 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 FADS6Q8N9I5 356 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 OR2M3Q8NG83 312 aa12.22□□□□□ -0.45
VMP1-217ENST00000593168 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms