RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	SLC16A11	Q8NCK7	471 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	OR4A15	Q8NGL6	344 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	OR2V1	Q8NHB1	315 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	ZFP28	Q8NHY6	868 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	ABHD3	Q8WU67	409 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	TMEM171	Q8WVE6	324 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	JADE3	Q92613	823 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	S100PBP	Q96BU1	408 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	LRRC58	Q96CX6	371 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	GIN1	Q9NXP7	522 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	PCDHGB4	Q9UN71	923 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	LAMP3	Q9UQV4	416 aa		11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	FBN1	P35555	2871 aa	Known RBP	11.8	□□□□□ -0.52
NPC1-212	ENST00000591107	SON	P18583	2426 aa	Known RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	IGHV3-15	A0A0B4J1V0	119 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	ALG1L2	C9J202	215 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	NKX2-2	O95096	273 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	SYNGR4	O95473	234 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	ZNF17	P17021	662 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	SOAT1	P35610	550 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	PSMD4	P55036	377 aa	Known RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	C17orf67	Q0P5P2	114 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	TNK1	Q13470	666 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	VEZF1	Q14119	521 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	FGFBP1	Q14512	234 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	LRIF1	Q5T3J3	769 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	HBM	Q6B0K9	141 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	PRSS57	Q6UWY2	283 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	NUFIP2	Q7Z417	695 aa	Known RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	ATP6V1C2	Q8NEY4	427 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	NUP43	Q8NFH3	380 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	KBTBD8	Q8NFY9	601 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	OR5P2	Q8WZ92	322 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	ZNF524	Q96C55	264 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	MS4A4E	Q96PG1	132 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	CGREF1	Q99674	301 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	CADM1	Q9BY67	442 aa	Known RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	SLC6A13	Q9NSD5	602 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	VAPA	Q9P0L0	249 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	MRTO4	Q9UKD2	239 aa	Known RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	MCTS1	Q9ULC4	181 aa	Known RBP	11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	CR1	P17927	2039 aa		11.79	□□□□□ -0.52
NPC1-212	ENST00000591107	TRBV5-3	A0A0A0MS03	114 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	LINC01387	J3KSC0	135 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	HS3ST1	O14792	307 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	GSC2	O15499	205 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	DNAJC8	O75937	253 aa	Predicted RBP	11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	SLITRK5	O94991	958 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	KCNK2	O95069	426 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	NPPA	P01160	153 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	SOD3	P08294	240 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	HOXB9	P17482	250 aa	Predicted RBP	11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	PTN	P21246	168 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	EDNRA	P25101	427 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	MAP3K8	P41279	467 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	PCYT1A	P49585	367 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	ZNF41	P51814	821 aa	Predicted RBP	11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	MANF	P55145	182 aa	Known RBP	11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	HBA1	P69905	142 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	ZNF117	Q03924	483 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	MLC1	Q15049	377 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	TOMM34	Q15785	309 aa	Predicted RBP	11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	ZNF621	Q6ZSS3	439 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	MSRB3	Q8IXL7	192 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	COX18	Q8N8Q8	333 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	CDS1	Q92903	461 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	MCUR1	Q96AQ8	359 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	KLHL15	Q96M94	604 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	HOPX	Q9BPY8	73 aa	Predicted RBP	11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	THTPA	Q9BU02	230 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	CXorf36	Q9H7Y0	433 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	COQ10B	Q9H8M1	238 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	C3orf14	Q9HBI5	128 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	PLSCR4	Q9NRQ2	329 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	SLC25A37	Q9NYZ2	338 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	PCDHB14	Q9Y5E9	798 aa		11.78	□□□□□ -0.52
NPC1-212	ENST00000591107	NUP214	P35658	2090 aa	Predicted RBP	11.77	□□□□□ -0.52
NPC1-212	ENST00000591107	EFNA2	O43921	213 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	NDUFS7	O75251	213 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	GCM2	O75603	506 aa	Predicted RBP	11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	ZCCHC18	P0CG32	403 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	SLC6A2	P23975	617 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	PGM1	P36871	562 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	SLC7A2	P52569	658 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	FAP	Q12884	760 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	SELPLG	Q14242	412 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	ZNF239	Q16600	458 aa	Known RBP	11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	GLYR1	Q49A26	553 aa	Predicted RBP	11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	RUNDC3A	Q59EK9	446 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	RABL3	Q5HYI8	236 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	NANOGP8	Q6NSW7	305 aa		11.77	□□□□□ -0.53
NPC1-212	ENST00000591107	ADAM5	Q6NVV9	412 aa		11.77	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms