RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 SULT2B1O00204 365 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 SMAD9O15198 467 aaKnown RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 H6PDO95479 791 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 CNOT4O95628 575 aaKnown RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 TROVE2P10155 538 aaKnown RBP eCLIP12.74□□□□□ -0.37
MBD1-220ENST00000589758 CDKN2CP42773 168 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 DIO1P49895 249 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 ANXA11P50995 505 aaKnown RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 KCNJ10P78508 379 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 HPCAP84074 193 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 GPAT3Q53EU6 434 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 SYT14P1Q58G82 188 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 ALKBH2Q6NS38 261 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 DNAJC14Q6Y2X3 702 aaPredicted RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 ZNF621Q6ZSS3 439 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 Q6ZT83 130 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 BHLHA15Q7RTS1 189 aaPredicted RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 GRINAQ7Z429 371 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
MBD1-220ENST00000589758 VPS33AQ96AX1 596 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 CCDC115Q96NT0 180 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 SLC35A5Q9BS91 424 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 POTEKPQ9BYX7 375 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 EXOSC3Q9NQT5 275 aaKnown RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 ZNF701Q9NV72 531 aaPredicted RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 ING1Q9UK53 422 aaPredicted RBP12.74□□□□□ -0.37
MBD1-220ENST00000589758 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 CENPVL1A0A0U1RR11 272 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 FAM234BA2RU67 622 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 CCDC154A6NI56 674 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 NR5A2O00482 541 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 C1QCP02747 245 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 IL6P05231 212 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 CD3EP07766 207 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 HTR3AP46098 478 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 CLK1P49759 484 aaKnown RBP12.73□□□□□ -0.37
MBD1-220ENST00000589758 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
MBD1-220ENST00000589758 PDK3Q15120 406 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 TAB1Q15750 504 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 MAPK14Q16539 360 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 AGKQ53H12 422 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 FRRS1Q6ZNA5 592 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 OLIG3Q7RTU3 272 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 GALNT5Q7Z7M9 940 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 MTDHQ86UE4 582 aaKnown RBP12.73□□□□□ -0.37
MBD1-220ENST00000589758 ZHX1-C8orf76Q96EF9 292 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 CCDC167Q9P0B6 97 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 HDGFL3Q9Y3E1 203 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 ARID1AO14497 2285 aa12.73□□□□□ -0.37
MBD1-220ENST00000589758 VPS13CQ709C8 3753 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 FLNAP21333 2647 aaKnown RBP12.72□□□□□ -0.37
MBD1-220ENST00000589758 HMGN4O00479 90 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 RFXANKO14593 260 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 DNPH1O43598 174 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 ANP32DO95626 131 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 PMS2P2O95744 297 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 LY6G6DO95868 133 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 FESP07332 822 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 TFPIP10646 304 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 RYKP34925 604 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 ARFIP2P53365 341 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 GYS2P54840 703 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 RPS4XP62701 263 aaKnown RBP12.72□□□□□ -0.37
MBD1-220ENST00000589758 CHRNEQ04844 493 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 FUT5Q11128 374 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 GNA13Q14344 377 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 SQLEQ14534 574 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 C6orf10Q5SRN2 563 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 CGB2Q6NT52 195 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 Q71RC1 249 aaPredicted RBP12.72□□□□□ -0.37
MBD1-220ENST00000589758 P2RY8Q86VZ1 359 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 CMIPQ8IY22 773 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 ZNF100Q8IYN0 542 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 CIARTQ8N365 385 aaPredicted RBP12.72□□□□□ -0.37
MBD1-220ENST00000589758 PNPT1Q8TCS8 783 aaKnown RBP12.72□□□□□ -0.37
MBD1-220ENST00000589758 PMM1Q92871 262 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 FBXW5Q969U6 566 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 MUCL1Q96DR8 90 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 TRNT1Q96Q11 434 aaKnown RBP12.72□□□□□ -0.37
MBD1-220ENST00000589758 ZNF300Q96RE9 604 aaPredicted RBP12.72□□□□□ -0.37
MBD1-220ENST00000589758 SIKE1Q9BRV8 207 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 CCDC134Q9H6E4 229 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 RMND5AQ9H871 391 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 CTPS2Q9NRF8 586 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 EMC3Q9P0I2 261 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 CHRNA9Q9UGM1 479 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 PRSS50Q9UI38 385 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 TRIM33Q9UPN9 1127 aa12.72□□□□□ -0.37
MBD1-220ENST00000589758 IGKV3D-15A0A087WSY6 115 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 PRAMEF27A3QJZ7 478 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 CLOCKO15516 846 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 COX5AP20674 150 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 MAGEA8P43361 318 aa12.71□□□□□ -0.37
MBD1-220ENST00000589758 IDH2P48735 452 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms