RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 DDOSTP39656 456 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TGM4P49221 684 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ACTA2P62736 377 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ACTG2P63267 376 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 RIN1Q13671 783 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 CCDC92Q53HC0 331 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 KIAA0895LQ68EN5 471 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 CNIH2Q6PI25 160 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 C20orf204Q6ZNR8 217 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 LRRC28Q86X40 367 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF440Q8IYI8 595 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SIRT6Q8N6T7 355 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SYT14Q8NB59 555 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 C7orf57Q8NEG2 295 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 PFN4Q8NHR9 129 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF486Q96H40 463 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 DGAT2Q96PD7 388 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ATF6BQ99941 703 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ARPC5LQ9BPX5 153 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 PELOQ9BRX2 385 aaKnown RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 LMF2Q9BU23 707 aaKnown RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 RNF121Q9H920 327 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TEKT2Q9UIF3 430 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 KLHL21Q9UJP4 597 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 NOX1Q9Y5S8 564 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 CHD9Q3L8U1 2897 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 DOCK9Q9BZ29 2069 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 DOCK8Q8NF50 2099 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 A0A0B4J2E0 115 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 A0A1B0GX12 115 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 FAM172BPA6NC97 362 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 EPOPA6NHQ4 379 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 CD8B2A6NJW9 211 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 EFCAB7A8K855 629 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 RFXAPO00287 272 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 NARSO43776 548 aaKnown RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 HPGDSO60760 199 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TRIM3O75382 744 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 RDH16O75452 317 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 NDUFB2O95178 105 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 HLA-DQB1P01920 261 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SBK2P0C263 348 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ZGLP1P0C6A0 271 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 THEGLP0DJG4 465 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 CD8BP10966 210 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 GABRG2P18507 467 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TBXA2RP21731 343 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 S100A1P23297 94 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 MAP2K3P46734 347 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 RFX2P48378 723 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 MGAT2Q10469 447 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SF3A2Q15428 464 aaKnown RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 IDNKQ5T6J7 187 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 BICRALQ6AI39 1079 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 HBMQ6B0K9 141 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TMEFF1Q8IYR6 380 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 RDH10Q8IZV5 341 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SLC44A3Q8N4M1 653 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 POMGNT2Q8NAT1 580 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF527Q8NB42 609 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SIMC1Q8NDZ2 872 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 OR5T3Q8NGG3 340 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 OR6F1Q8NGZ6 308 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 OR51A7Q8NH64 312 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 GRHL3Q8TE85 626 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 OIT3Q8WWZ8 545 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 HOXB13Q92826 284 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ANKRD9Q96BM1 317 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TCTN2Q96GX1 697 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 CCNL2Q96S94 520 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF649Q9BS31 505 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 NDEL1Q9GZM8 345 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 PPP1R3EQ9H7J1 279 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 C20orf141Q9NUB4 165 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 RBFOX1Q9NWB1 397 aaKnown RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 POMT2Q9UKY4 750 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 OR10H1Q9Y4A9 318 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 ELOA3CA0A087WX78 387 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 A0A1B0GWA3 101 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 GXYLT2A0PJZ3 443 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ELOA3DA6NLF2 546 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ORC5O43913 435 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 DNAJB6O75190 326 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PTP4A3O75365 173 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ARL6IP5O75915 188 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 LALBAP00709 142 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 OR2T7P0C7T2 308 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 HPGDP15428 266 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 HLA-DMAP28067 261 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PPM1FP49593 454 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 GBX2P52951 348 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ATP12AP54707 1039 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 RAB25P57735 213 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 FAM53BQ14153 422 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PON3Q15166 354 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 ELOA3BQ3SY89 546 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 HACD4Q5VWC8 232 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PRSS41Q7RTY9 318 aa6.81□□□□□ -1.32
ZNF540-206ENST00000589117 PARGQ86W56 976 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms