RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MTDHQ86UE4 582 aaKnown RBP12.08□□□□□ -0.48
HDAC5-208ENST00000588419 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 NUDCD3Q8IVD9 361 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 CCDC103Q8IW40 242 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 FBXL14Q8N1E6 418 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 ZNF781Q8N8C0 355 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 OR52E4Q8NGH9 312 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 PIGXQ8TBF5 258 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 ROPN1LQ96C74 230 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 RADILQ96JH8 1075 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 ARL5BQ96KC2 179 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 ASB6Q9NWX5 421 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 LGALS13Q9UHV8 139 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 SLC35A3Q9Y2D2 325 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 ATP23Q9Y6H3 246 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 FAM234BA2RU67 622 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 E7EQL1 145 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 ETV2O00321 342 aaPredicted RBP12.07□□□□□ -0.48
HDAC5-208ENST00000588419 TLX2O43763 284 aaPredicted RBP12.07□□□□□ -0.48
HDAC5-208ENST00000588419 GPRIN2O60269 458 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 MRPL33O75394 65 aaKnown RBP12.07□□□□□ -0.48
HDAC5-208ENST00000588419 NUDT17P0C025 328 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 DHRS4L1P0CG22 281 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 UQCRC2P22695 453 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 APOBEC1P41238 236 aaKnown RBP12.07□□□□□ -0.48
HDAC5-208ENST00000588419 IDH2P48735 452 aaKnown RBP12.07□□□□□ -0.48
HDAC5-208ENST00000588419 FABP6P51161 128 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 FOXG1P55316 489 aaPredicted RBP12.07□□□□□ -0.48
HDAC5-208ENST00000588419 VSNL1P62760 191 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 FUT5Q11128 374 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 B3GLCTQ6Y288 498 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 FRRS1Q6ZNA5 592 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 GRINAQ7Z429 371 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 P2RY8Q86VZ1 359 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 MUC15Q8N387 334 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 SPATA3Q8NHX4 192 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 ZBTB9Q96C00 473 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 SLC35A5Q9BS91 424 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 CCDC106Q9BWC9 280 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 MANSC1Q9H8J5 431 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 AKTIPQ9H8T0 292 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 CBLN4Q9NTU7 201 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 TAS2R16Q9NYV7 291 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 MARCOQ9UEW3 520 aaPredicted RBP12.07□□□□□ -0.48
HDAC5-208ENST00000588419 MGAT4BQ9UQ53 548 aa12.07□□□□□ -0.48
HDAC5-208ENST00000588419 ZNF716A6NP11 495 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 A8MV72 311 aaPredicted RBP12.06□□□□□ -0.48
HDAC5-208ENST00000588419 AP3D1O14617 1153 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 GPR171O14626 319 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 ANKRD28O15084 1053 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 PGM3O95394 542 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 PMS2P2O95744 297 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 AGR2O95994 175 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 IFNA2P01563 188 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 CDH2P19022 906 aaPredicted RBP12.06□□□□□ -0.48
HDAC5-208ENST00000588419 CD40P25942 277 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 TTKP33981 857 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 MAGEA8P43361 318 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 CHRFAM7AQ494W8 412 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 SPANXN4Q5MJ08 99 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 EMBQ6PCB8 327 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 PODNL1Q6PEZ8 512 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 ZNF525Q8N782 197 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 VPS37AQ8NEZ2 397 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 DHRS9Q9BPW9 319 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.06□□□□□ -0.48
HDAC5-208ENST00000588419 ASIC5Q9NY37 505 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 HDGFL3Q9Y3E1 203 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 SLC25A15Q9Y619 301 aa12.06□□□□□ -0.48
HDAC5-208ENST00000588419 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 CUBNO60494 3623 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 IGKV3D-15A0A087WSY6 115 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 TMED7-TICAM2A0A0A6YYA0 188 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 TMEM72A0PK05 275 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 C1QCP02747 245 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 ITGA5P08648 1049 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 PTAFRP25105 342 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 ABCE1P61221 599 aaKnown RBP12.05□□□□□ -0.48
HDAC5-208ENST00000588419 KCNJ10P78508 379 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 RAB35Q15286 201 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 KRT71Q3SY84 523 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 FAM174BQ3ZCQ3 159 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 ANXA8L1Q5VT79 327 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 SAXO2Q658L1 398 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 DNAJC14Q6Y2X3 702 aaPredicted RBP12.05□□□□□ -0.48
HDAC5-208ENST00000588419 SSX8Q7RTT4 187 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 RNF130Q86XS8 419 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 FAM71CQ8NEG0 241 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 OR8J2Q8NGG1 315 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 PNPT1Q8TCS8 783 aaKnown RBP12.05□□□□□ -0.48
HDAC5-208ENST00000588419 MIPOL1Q8TD10 442 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.05□□□□□ -0.483e-9■■■■■ 80.2
HDAC5-208ENST00000588419 CNOT9Q92600 299 aaKnown RBP12.05□□□□□ -0.48
HDAC5-208ENST00000588419 DDIT4LQ96D03 193 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 ZG16BQ96DA0 208 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 NUF2Q9BZD4 464 aa12.05□□□□□ -0.48
HDAC5-208ENST00000588419 POLE3Q9NRF9 147 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms