RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	UQCC3	Q6UW78	93 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLC25A42	Q86VD7	318 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	ECHDC2	Q86YB7	292 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	EGFL6	Q8IUX8	553 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	C17orf47	Q8NEP4	570 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	VN1R17P	Q8TDU5	208 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	ST8SIA1	Q92185	356 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	TOMM40L	Q969M1	308 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	UBE2E3	Q969T4	207 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF599	Q96NL3	588 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	IL4I1	Q96RQ9	567 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	VGLL1	Q99990	258 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	NUP58	Q9BVL2	599 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	KRTAP1-5	Q9BYS1	174 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	RAB34	Q9BZG1	259 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	ELOVL4	Q9GZR5	314 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	SMYD3	Q9H7B4	428 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	NANS	Q9NR45	359 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	NUDT15	Q9NV35	164 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	PDE10A	Q9Y233	779 aa		4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	CAB39	Q9Y376	341 aa	Predicted RBP	4.27	□□□□□ -1.73
TUBD1-208	ENST00000588009	SHANK3	Q9BYB0	1731 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZFYVE16	Q7Z3T8	1539 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	HEATR9	A2RTY3	570 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009		A8MX80	341 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009		E7ESA3	106 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	SULT2B1	O00204	365 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	RGS16	O15492	202 aa	Predicted RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	LAT	O43561	262 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	CXCL13	O43927	109 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	PRKY	O43930	277 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	PFKFB2	O60825	505 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF253	O75346	499 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	WBP4	O75554	376 aa	Known RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	UPK3A	O75631	287 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	GPX5	O75715	221 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ATP5L	O75964	103 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ETS2	P15036	469 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	IGHV1-2	P23083	117 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	YWHAB	P31946	246 aa	Known RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	XCR1	P46094	333 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	STAR	P49675	285 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	DAP3	P51398	398 aa	Known RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	PRKX	P51817	358 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	RIPK4	P57078	832 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	MRPS11	P82912	194 aa	Known RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	KLHL38	Q2WGJ6	581 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	C14orf177	Q52M58	125 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	DMRTC1	Q5HYR2	192 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	LIPN	Q5VXI9	398 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	METTL7B	Q6UX53	244 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF497	Q6ZNH5	498 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	H2BFWT	Q7Z2G1	175 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	SERINC5	Q86VE9	423 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLC47A2	Q86VL8	602 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	OR2L13	Q8N349	312 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	TCTEX1D2	Q8WW35	142 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	MRPS31	Q92665	395 aa	Known RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	PSMG2	Q969U7	264 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	TRIM62	Q9BVG3	475 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	TRIM15	Q9C019	465 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	FAM192A	Q9GZU8	254 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF385D	Q9H6B1	395 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLC2A8	Q9NY64	477 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	B3GNT2	Q9NY97	397 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	SPRR3	Q9UBC9	169 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	PISD	Q9UG56	409 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	WARS2	Q9UGM6	360 aa	Known RBP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	PHF11	Q9UIL8	331 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	FHAD1	B1AJZ9	1412 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	UACA	Q9BZF9	1416 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	KDM5C	P41229	1560 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	RALGAPA1	Q6GYQ0	2036 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ANKRD30B	Q9BXX2	1392 aa		4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
TUBD1-208	ENST00000588009	ABCA5	Q8WWZ7	1642 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	PPIAL4E	A0A075B759	164 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	GOLGA8S	H3BPF8	625 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009		K7ENP7	123 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	HAS3	O00219	553 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	OR10H3	O60404	316 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	CABYR	O75952	493 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	ABCA8	O94911	1581 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	GNA14	O95837	355 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	AGT	P01019	485 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	IGHV3-13	P01766	116 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	PPIAL4F	P0DN26	164 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	ATP1B2	P14415	290 aa	Predicted RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	GCFC2	P16383	781 aa	Known RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	GAL	P22466	123 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	ADORA2B	P29275	332 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	FGF9	P31371	208 aa	Predicted RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	RDX	P35241	583 aa	Known RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	QARS	P47897	775 aa	Known RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	RPL29	P47914	159 aa	Known RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	CRYBB1	P53674	252 aa	Predicted RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	IST1	P53990	364 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	RPS14	P62263	151 aa	Known RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	PAX2	Q02962	417 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms