RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 LRBAP50851 2863 aa13.24□□□□□ -0.29
ATG4D-207ENST00000587256 CGAP01215 116 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 ETS2P15036 469 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 SLC6A2P23975 617 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 AQP1P29972 269 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 KRTAP10-9P60411 292 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 KLF10Q13118 480 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 CAPRIN1Q14444 709 aaKnown RBP13.23□□□□□ -0.29
ATG4D-207ENST00000587256 TRMT5Q32P41 509 aaKnown RBP13.23□□□□□ -0.29
ATG4D-207ENST00000587256 MMEL1Q495T6 779 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 FBXW10Q5XX13 1052 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 ZNF474Q6S9Z5 364 aaPredicted RBP13.23□□□□□ -0.29
ATG4D-207ENST00000587256 SERPINA11Q86U17 422 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 STK32CQ86UX6 486 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 SLC43A2Q8N370 569 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 CLIP4Q8N3C7 705 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 ZNF610Q8N9Z0 462 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 DDIT4LQ96D03 193 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 SPATA5L1Q9BVQ7 753 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 OR11A1Q9GZK7 315 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 TMEM38AQ9H6F2 299 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 SAR1AQ9NR31 198 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 KLHL9Q9P2J3 617 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 OSGIN1Q9UJX0 560 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 CAPN7Q9Y6W3 813 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 POLQO75417 2590 aa13.23□□□□□ -0.29
ATG4D-207ENST00000587256 TMEM72A0PK05 275 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 SH3D21A4FU49 640 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 BBIP1A8MTZ0 92 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 MRASO14807 208 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 SMAD9O15198 467 aaKnown RBP13.22□□□□□ -0.29
ATG4D-207ENST00000587256 FRS3O43559 492 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 PRKD3O94806 890 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 PRG2P13727 222 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 CXCR1P25024 350 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 FKBP2P26885 142 aaKnown RBP13.22□□□□□ -0.29
ATG4D-207ENST00000587256 PRKAR1BP31321 381 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 FAM27E3Q08E93 113 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 SELPLGQ14242 412 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 TMPPEQ6ZT21 453 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 SNX32Q86XE0 403 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 ADGRG3Q86Y34 549 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 TUSC5Q8IXB3 177 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 C11orf65Q8NCR3 313 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 HIPK4Q8NE63 616 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 C10orf82Q8WW14 230 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 ZNF317Q96PQ6 595 aaPredicted RBP13.22□□□□□ -0.29
ATG4D-207ENST00000587256 ZNF607Q96SK3 696 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 GPATCH1Q9BRR8 931 aaKnown RBP13.22□□□□□ -0.29
ATG4D-207ENST00000587256 TACO1Q9BSH4 297 aaKnown RBP13.22□□□□□ -0.29
ATG4D-207ENST00000587256 GP6Q9HCN6 339 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 FANCFQ9NPI8 374 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 ELOVL5Q9NYP7 299 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 SLC13A4Q9UKG4 626 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 HDGFL3Q9Y3E1 203 aa13.22□□□□□ -0.29
ATG4D-207ENST00000587256 MYO9AB2RTY4 2548 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 PRORSD1PA6NEY8 169 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 A6NNC1 897 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 FBP2O00757 339 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 ZNF208O43345 1280 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 PMS2P2O95744 297 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 EPXP11678 715 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 CCKARP32238 428 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 ACAA2P42765 397 aaKnown RBP13.21□□□□□ -0.29
ATG4D-207ENST00000587256 CLK1P49759 484 aaKnown RBP13.21□□□□□ -0.29
ATG4D-207ENST00000587256 NCALDP61601 193 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 RASGEF1BQ0VAM2 473 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 CYLC2Q14093 348 aaPredicted RBP13.21□□□□□ -0.29
ATG4D-207ENST00000587256 COQ5Q5HYK3 327 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 REP15Q6BDI9 236 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 LSRQ86X29 649 aaPredicted RBP13.21□□□□□ -0.29
ATG4D-207ENST00000587256 ARMC8Q8IUR7 673 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 ARL5BQ96KC2 179 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 PSD2Q9BQI7 771 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 MED18Q9BUE0 208 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 POLDIP3Q9BY77 421 aaKnown RBP13.21□□□□□ -0.29
ATG4D-207ENST00000587256 KLHL4Q9C0H6 718 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 PLSCR4Q9NRQ2 329 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 NDRG3Q9UGV2 375 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 CHST2Q9Y4C5 530 aa13.21□□□□□ -0.29
ATG4D-207ENST00000587256 CREBBPQ92793 2442 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 C16orf97H3BN30 126 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 CASKO14936 926 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 DNPH1O43598 174 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 CYTIPO60759 359 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 SERPINB7O75635 380 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 CTAG2O75638 210 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 YES1P07947 543 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 KLK2P20151 261 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 UGT2B10P36537 528 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 MAP2K6P52564 334 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 OR2B6P58173 313 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 HOXC5Q00444 222 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 RBBP4Q09028 425 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 ADRM1Q16186 407 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 ABLIM2Q6H8Q1 611 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 CDH24Q86UP0 819 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms